Beta vulgaris (sugar beet): 104897786
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Entry
104897786 CDS
T03548
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03020
RNA polymerase
bvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104897786
09124 Replication and repair
03420 Nucleotide excision repair
104897786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104897786
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104897786
Enzymes [BR:
bvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104897786
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104897786
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104897786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
RE_ApaLI
MIF4G_like_2
TACC_C
Motif
Other DBs
NCBI-GeneID:
104897786
NCBI-ProteinID:
XP_010683034
LinkDB
All DBs
Position
6:complement(57113332..57122847)
Genome browser
AA seq
1836 aa
AA seq
DB search
MDTRFPYSPAEVSKVHLIQFGILSPDEIRQMSVVQVEFSETTERGKPKPGGLSDMRLGTI
DRKLKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK
FKQALKIRNPKNRLKRILEACKNKKKCEGGDSLDVQDQDQDDGESAKKTRGGCGAQQPTF
TIEGMKIIAEYKMTKKKSDEQEQLPEPAERKQQLSAEKVLSVLKRVSDEDCQLMGFNPKY
ARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHI
ISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFS
ARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYI
IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY
STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANKPVMGIVQ
DTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPQPAILKPRPIWTGKQVFNLIIPKQ
INLIRFSAWHQETETGFLTPGDTRVMVERGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD
AARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMETINETISKAKNEVKNLIRTAQEK
QLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQ
MTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG
REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES
QKLDSLKMKKTEFEATYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVFDAEVQKLEADR
CQLAKDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSNMHPMEIVEAVDQLQERLKV
VPGDDFLSKEAQKNATLFFNILLRSTLSSKRVLKEFKLNREAFDWVIGEIESRFLQSLVA
PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF
LNPEISKTKERAKNVQCTLEYTCLRSVTHATEVWYDPDPMSTLIDEDVDFVRSYYEMPDE
EVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTDDNAEKLILRIR
IVNDEGQKGDMEDDSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQSKVNKFDEEKGF
KAETEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVMEVLGIEAVRKALLDELRVVISF
DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAES
DYLRGVTENIMLGQLAPIGTGGCSLYLNEEMLQHAIELQLPSYVEGLEFGMTPARSPIAG
TPYHDGMMSPSYLFSPNLRHSPISENAAFSPFVTNMAFSPAASPNYGGGSPGYSPTSPGY
SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSAKYSPSLAY
SPSSPRISPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPSYSPSSPYSSGPSPDYSPSSP
QYSPSAGYSPSAPGYSPSSTSQYTPQTSDKDDKSSR
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggatactcgatttccgtactcgccggcggaagtatcgaaagttcatttgattcagttc
ggaattctcagtccagatgagatccggcaaatgtcggtggtgcaagtggagtttagcgag
acgacggagagagggaagccgaaaccaggtggtttgagtgatatgaggcttggaacaatt
gataggaagctcaaatgtgatacttgtacggcgaatatggcggaatgtcctggtcatttc
ggacaccttgagctcgctaaacctatgtttcatattggatttttgaagactgtgcttagt
attatgcgttgtgtttgcttcaattgctctaagattctcgcggatgaggaagaccacaaa
tttaaacaagcattgaaaattaggaatccgaaaaatcggttgaagagaatattggaagcc
tgcaaaaacaaaaagaaatgtgaaggaggtgattccttagatgtacaggatcaggatcag
gatgatggagagtctgccaaaaagactcgtggtggctgtggtgcacagcagccgaccttc
actattgaaggtatgaaaattattgctgaatacaagatgacaaagaagaaaagtgatgag
caggaacaactccctgagcctgctgagagaaagcagcagctttctgctgaaaaggtgctc
agtgttctgaagagagtgagtgatgaagactgtcaattgatgggtttcaatcccaaatat
gctcgccctgactggatgattctgcaagttctccctattcctccacccccagtgaggcct
tctgtgatgatggatacctcttctaggagtgaggatgatttgacccatcaattagctatg
attattcgtcataatgacaatctgagaagacaagagaggaatggggcgcctgcacatatc
atctccgaatttgcccagttgctgcagtttcatattgctacatactttgacaacgagctg
cctggacagccaagggctacgcaacgatcaggtagaccaattaaatccatatgtacaagg
ctgaaagccaaagaaggtcggataagaggcaatttgatgggaaaacgagtggacttctcg
gcacgtactgtcattactcctgatccaaatattaatatcgacgaactcggtgtgccttgg
agtatagcattgaatctcacatatccagagactgtgactccttataatattgaaaggtta
aaagagctggttgactatggtcctcatcctcctcccggtaaaactggggccaaatatatc
atcagagatgatggtcagaggcttgatctccgttatctgaagaagagtagtgaccatcat
ttggaattgggttacaaggttgagaggcatttgaatgatggagactttgtgctttttaat
cgacaacccagtcttcataaaatgtccatcatgggtcacagaataaagattatgccctat
tccacattccgattgaatctgtctgttacatcaccttacaatgctgatttcgatggtgat
gaaatgaacatgcatgttcctcaatcctttgagactcgtgcagaagttcttgagctaatg
atggttcctaaatgtatcgtttctccacaagcaaacaaacctgtcatgggaattgtgcag
gatacccttttgggttgtcgtaaaatcacaaagagggatacttttattgaaaaggatgtt
ttcatgaacactcttatgtggtgggaagatttcgatggaaaagttcctcagcctgctatt
ctgaagcccaggcctatatggactggaaagcaagtattcaatcttatcataccgaagcag
ataaatctcatcagattttctgcatggcaccaagagacagaaacgggttttcttactccc
ggggatactcgtgtaatggtagagagaggagagctactatctggaacactgtgcaagaag
accctagggtcatcgagtgggagtttgattcatgtcatttgggaagaagttggaccggat
gctgctcgtaaatttttggggcacacccagtggcttgtaaattattggctattacagcaa
gcttttagtattggtataggagatacaattgctgatgcatcaacgatggaaactatcaat
gaaactatatcgaaagctaaaaatgaagtgaaaaaccttataagaactgctcaggaaaag
cagttggagcctgaacctggacgtactatgatggaatcatttgaaaacagagttaatcag
gttttgaataaagctcgtgatgatgctggaagtagtgcccagaggagtctttctgagagt
aacaacctaaaggctatggttactgcagggtccaaaggaagttttatcaacatttcccag
atgactgcttgtgtaggacagcagaatgttgaaggaaaacgaataccttttggttttgtt
ggtcgaacgttgccccatttcacaaaggatgattacggtccagaaagtcgtgggtttgtg
gagaattcgtatctgagaggattaactcctcaggagttctttttccatgctatgggtggt
agagaaggtttaattgatactgctgttaaaacctctgagactggctacatacagcggaga
ctggttaaggctatggaggatatcatggttaaatatgatggcactgttagaaattccctt
ggagatgtcatacagtttctctatggtgaagacggcatggatgctgtttggatagaatcc
caaaaattggattctctgaaaatgaagaagacagaatttgaagctacatacagatatgag
ttcgacgctgacaattgggagccagactacatgttgaaagagcatgtggatgatctgaaa
accattcgtgagttccgtaatgtgtttgatgcagaagtccaaaaacttgaagcagataga
tgtcaacttgcgaaagatattgcaactacaggtgacaattcttggccattgcctgtgaac
cttaagaggctcctgtggaatgcccaaaagacctttaaggttgacatgcgagaaaagtct
aatatgcacccgatggaaatcgtggaagctgtagatcagcttcaggagaggttgaaagta
gttcctggtgatgacttcttgagcaaggaggctcagaagaatgctaccctattctttaat
atcttgcttcgtagtacgctgtccagcaaacgtgtcttgaaggagttcaagcttaaccgt
gaagcatttgactgggttattggtgagatagagtctcggtttttgcaatctcttgtagct
cctggggaaatgataggttgtgttgctgcccagtcaattggtgagcctgccactcagatg
acacttaacacttttcactatgctggtgttagtgctaagaatgtcactcttggtgttcca
aggttgagggaaattatcaatgtggcaaagaaaatcaaaactccttctctatcggtgttt
ttgaacccggaaattagcaagacaaaagaaagggcgaaaaatgtccaatgtactttagaa
tatacttgtctgcgaagtgttacacatgccactgaagtgtggtatgatccagatcctatg
agcacccttattgatgaggatgtggactttgtcaggtcgtactatgaaatgccagatgaa
gaggtttcaccggataaaatttctccttggttgcttcgtatagaattgaatcgtgaaatg
atggtggacaaaaaattaagcatggctgatattgcggagaaaatcaacttggaattcagt
gatgacatgacgtgtatcttcactgatgacaatgctgaaaagctgatccttcgtattcgt
attgtgaatgatgaaggtcaaaagggtgacatggaagatgactctgctgaggatgatgta
tttttgaaaaaggtcgcaggtagcatgctgactgagatggcacttaaaggaattccagat
atcaacaaggtcttcatcaaacagagtaaagtgaataaatttgatgaggagaagggtttc
aaggctgaaactgaatggatgctggatactgaaggtgtcaatcttcttgctgttatgtgt
catgaagatgtggatgcaacaaggacgacgagtaatcacttgattgaagttatggaagtt
cttggaattgaggctgttcgtaaggccttgctagatgagttgcgagttgttatttctttt
gatggatcatatgtgaattatcgtcatttggccattttgtgtgatacaatgacatatcgt
ggacatttgatggctattactcgtcatggtatcaatcggaatgatacggggcctttaatg
agatgctcatttgaagaaactgtggatattcttcttgatgctgctgtgtatgcggagtcg
gattatttgaggggtgtaactgaaaatatcatgttgggacagctagcaccaattgggact
ggtggctgttcattatatcttaatgaggagatgttgcagcatgctattgaactccagctc
ccaagttatgtggaaggtttggaatttgggatgacgcctgcacgttcccccattgctgga
acaccttaccatgacgggatgatgtctccaagttacttgtttagcccaaacctccgacat
tcacccatctcagagaatgctgccttttctccctttgttactaacatggccttctctcct
gctgcatcacctaattatggtgggggatcacctggatacagccccacttcaccgggatat
agccctacttcacccggatatagccctacttctcctggatatagccctacctcgccgact
tacagtccttcgtctcctgggtacagtccaacaagcccagcatattcacccacgagccct
tcatactctcccacctcacccagctacagccccacttcgccgagctacagccccacttcg
ccgagctacagccccacttccccgagctacagccccacttctccagcttacagccctacc
tcaccggcatacagccctacctcaccagcttacagccccacttcgccgtcatacagcccc
acgtcgccatcgtacagccccacgtcgccatcatacagccccacgtcgccatcgtacagc
cccacttcgccatcatacagccccacatcgccttcgtatagtccgacttcacctgcttac
agtcctacttccccaggatatagtcccacgtctcctagctatagtcctacatctccaagc
tatagtcctacatctccaagctataatccgtcagccaaatacagtccctcacttgcatac
tctccaagcagtccaagaatatcaccttccagtccttacagtcctacctctccaaactac
agtccgacatcaccgtcttactcgccaacatcgccatcctactcgccttcaagcccaagt
tatagtccaagcagcccttatagttcaggtccaagtccggattatagccccagttctcca
caatacagtccaagtgcgggttattctccaagcgctcctggttattcaccatcatccacc
agtcagtacaccccacaaacgagtgacaaggatgataagagcagccgctga
DBGET
integrated database retrieval system
