Beta vulgaris (sugar beet): 104897796
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Entry
104897796 CDS
T03548
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104897796
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104897796
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104897796
NCBI-ProteinID:
XP_010683043
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All DBs
Position
6:complement(57275975..57287726)
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AA seq
669 aa
AA seq
DB search
MKIDKVSKWKGLLWILFFVQLLIAGDCRGKIDAPAGGKPNAQPTANPNGGVRVNATAKQV
VLDNGIVQVTLQVPEGYVTAIRYGGLENILDITNRVSDRGYWDIASATTGDNDGSDEIRL
AGTSFKIIKQTEDQAEISFLCPKTSSLPLQIDYRYILLRGRSGFYSYAIFGRDKGMAPMD
VDQIRTVYKLHTEKFRYMAVSDKLQREMPMMRDRETGQPLAYKEAVHLTNPTNPKIKGQV
DDKYQYACEDKDNKLHGWVCTDPSVGIWVITPSDEFRMGGPHKQDLTSHVGPNMLSMFHS
THYTGTELVMKFANGEPWKKVFGPYLVHLNSGKGDPRALWQEAKNQLQEELKSWPYEFPV
SEDFPKANQRGSVVGKLLVKDGSKPPVPANLGWVGLAQPGEAGSWQREMKGYQFWVQTDG
EGKFTIPNVHVGKYNLYAWAPGFIGDYKSASVIDIAPGKQINLGDQVYTPPRSGETLWEI
GFPDRSAAEFFVPDPSPDLANPVLNDQENKYRQYGLWDRYSEIYPKEDLTYTIGVSNHTK
DWFYAQVLRKTGDTYQPTVWQVVFPLKDVVPNGNYTLQIALAAANQAELQVRVNNPDSKV
LFSTLLIGKDNAIARHGIHGLYRLYSVGIPGNLLKSGQNTIFFRQSRNNEKFRGVMYDYV
RLEGPASPK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgacaaagtcagcaaatggaaggggctactttggatattattttttgtccaa
ttattaattgcaggagattgtagagggaaaattgatgcaccagcgggaggcaaaccaaat
gcacaaccaacagcaaatccaaatggtggtgttcgggttaatgcaactgccaagcaagtt
gtgttggacaatggcattgttcaagtcaccttacaagttccagagggctacgtcaccgca
atacgatatggtggcctagaaaatatacttgatattacgaatcgagtatctgatagagga
tactgggatatagcatcagctactaccggagacaacgatggctcagatgaaatacgactt
gcaggaacaagttttaaaattataaaacaaactgaggatcaggcagagatttcatttctc
tgtccgaagacttcatcgcttccactacaaatagattataggtatatattgcttcgtggt
cgctctggattctactcttatgctatattcgggcgtgataaaggaatggctcctatggat
gtggatcaaataagaactgtttataagcttcacactgaaaagttccgttatatggcagtt
tcggacaagttacaaagagaaatgccaatgatgcgagaccgtgagactggtcagccttta
gcctataaagaagctgttcatttgacaaatccaaccaatccaaaaataaaaggacaggtt
gacgacaagtaccaatatgcatgcgaagacaaagataacaagttacatggctgggtttgc
accgatccttcagttggaatttgggtcataacaccaagtgatgaattccgcatgggaggg
cctcataaacaagatcttacatctcatgttggcccaaatatgctttctatgtttcatagt
actcattatactggaaccgagttggtgatgaagttcgcaaatggtgagccatggaaaaag
gtatttggaccatatttggtgcatttgaattctgggaaaggagatcctcgtgcactatgg
caagaagcaaagaatcagctgcaagaggaacttaagagttggccttacgaattcccagta
tccgaagattttccaaaggcaaatcagcgtggatcagttgtgggtaaattactcgtcaaa
gatggatctaaaccacctgtaccagcgaatttagggtgggttggtttggcacaacctgga
gaagcgggctcatggcaaagggagatgaaaggatatcaattttgggttcagactgatggt
gaaggaaagtttacgataccaaatgttcatgttggcaagtacaacctttacgcatgggca
ccagggttcataggagattacaaatctgcatctgtaatcgacattgcaccagggaagcaa
attaacttgggtgatcaagtctacacacccccacgaagtggagagacactatgggaaatc
ggcttcccggaccgcagtgcagctgagttctttgtgccagacccaagtccagaccttgcc
aacccagtgttaaatgatcaggaaaacaagtacagacaatatggtctatgggatcgttac
tcagagatttaccctaaggaagatcttacttacactattggtgtcagtaatcataccaag
gattggttttatgctcaggtgctaaggaagacaggagacacatatcagccaaccgtatgg
caggttgtattccccttaaaggatgttgtgcccaatggtaactatacattacaaatcgcg
ctagcagctgcaaatcaagctgaactacaggttagggtcaacaaccctgactcgaaagtc
cttttctcaacattgctgataggaaaggacaatgcaatcgcaagacatgggattcacgga
ttgtatcgactatatagcgtcggtataccgggcaatttgcttaagagtggacaaaacacc
atctttttcaggcaatctaggaataatgaaaagttccgcggagttatgtatgattatgta
cgtttagaaggacctgcatctcctaagtaa
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