Beta vulgaris (sugar beet): 104897827
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Entry
104897827 CDS
T03548
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104897827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104897827
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104897827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Utp13
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_WDR41
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR19_1st
Cytochrom_D1
PEP5_VPS11_N
eIF2A
Beta-prop_HPS5
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_RIG_1st
PROPPIN
Nbas_N
Ge1_WD40
UTP15_C
SGL
WDR54
CCDC53
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
104897827
NCBI-ProteinID:
XP_010683079
LinkDB
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Position
1:23115606..23132713
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AA seq
880 aa
AA seq
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MASLSYKKSYRRTQSLQQFYTGGPFTVSSDGTFLVCTCDDSIKIVDSSNASIKSTIEGDS
EPVTAVALSPDDKLLFSSSHSRQIRVWDLSTLKCIRSWKGHDGPVMAMACDASGGLLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVTCIMFHPDPSRLLLFSGSDDASVRVWDLVTKKC
AATMEKHFSAVVSLTISEDQRFLLSAGRDKVVNMWDLKSYECKTTIPTYEVLEAVCAVNS
GTAFYDILSVQKPKKSKSSTQEVYFLTVGERGIVRIWNSEGAVCIFEQKISDVALSSDEN
DLRRGFTAACMLPSNQGLLCITADQQFLFYSLLKHSKEDLDMSLCKRLIGYNEEIVDMKF
VGEDENFLAVATNLEQVRVYDLASMSCSYVLAGHTGIVLCLDTCIASSGNTLIVTGSKDN
SVRLWDLETKSCLGVGIGHTGAVGAVACSKKCRDFFVSGSSDHTIKVWSFEGLDNDTKEA
TSLNAKAVVAAHDKDINCLAVAPFDSYVCSGSQDRTASIWKLPDLVHVAKLKGHKRGIWS
VEFSPVDKCVLTASGDKTMKMWALDGSCLKTFEGHTSSVLRASFITRGTQFVSTGADGLL
KLWTVTSNECIATYDEHEDKVWALAIGKKTEVLATGGGDAVVNLWSDSTAVDKEEAFRKE
EEGVLRGQELENAVSDADYAKAIQIAFELRRPRRLFELLSELCREKDAKDHMRKALQTLG
KEEVRQLFEYIREWNTKPKLCHIAQFVLFQVFSMLSPKEIVEVKGVAELLEGLIPYSQRH
FSRIDRLERSTFLLDYTLIGMSVIEPESDRGETRNSSRKKVDTDDSSDDRAAGKEPVSEP
TAETQQKKSSKKRKSKKSVEVCYKKVKLPGAEDSAVSLQA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttaagctacaagaagagctaccgtcgtactcaatcattacagcagttctac
actggtggacccttcacagtttcttctgacggcacttttctcgtttgcacttgcgacgat
tccatcaaaatcgtcgattcatcgaacgcttcaatcaaatccacaatcgaaggcgattcg
gagccggttacggcggttgcacttagtcctgatgataaattgctcttttcttcaagtcac
agtcgccaaattagggtttgggacctctctacgctcaaatgcattcgctcttggaaggga
catgatggcccggtgatggctatggcttgtgatgcatcaggtgggttgctggcaactgct
ggagctgatcggaaagtgcttgtttgggacgtcgatggtggattttgcacgcattatttt
aaagggcacaaaggggttgtcacttgtatcatgtttcatcctgatcctagtcgcctcctt
cttttctcaggaagtgatgatgcaagtgtccgggtttgggatcttgtcactaaaaagtgt
gccgctaccatggaaaaacatttctctgctgtggtttccttgacaatatctgaagatcaa
agattcttacttagcgcgggaagagataaggttgttaatatgtgggacctcaaaagttat
gaatgcaaaacgaccatacctacatacgaggtgcttgaagctgtttgtgctgttaattct
ggaactgcgttctatgacattttgtcagtacaaaaacctaagaagagcaaaagttccacg
caagaagtttactttttaactgttggtgaacgtgggattgttcgaatatggaactcagaa
ggtgcagtttgtatatttgagcagaagatttcagatgtagctcttagttcagacgaaaat
gatttaagaagaggtttcactgctgcctgcatgctaccatcaaatcaaggattgctatgc
atcactgctgatcagcagtttctgttttactccctcttgaagcattctaaagaagatctg
gatatgagtctttgtaagaggctgattggatacaatgaagaaattgtcgatatgaaattt
gtaggtgaagatgaaaactttcttgctgttgccaccaaccttgaacaggtgcgggtttac
gaccttgcttcaatgtcatgctcctatgtacttgctgggcatactgggatcgttttgtgt
cttgacacctgcatagcaagttctggaaatacacttattgtaactggaagcaaggacaat
agcgtcagattatgggatttagaaactaaaagttgcttaggggttggaattggtcatacg
ggagctgttggagctgttgcttgctcgaagaagtgccgggatttctttgttagtggtagt
agtgaccatacaatcaaagtgtggagcttcgaagggcttgacaatgatacaaaagaggcg
accagccttaatgcaaaagccgttgtagcagctcatgacaaggatattaactgtcttgct
gtagcacctttcgacagctatgtctgtagtggttctcaggatcgtactgcttctatatgg
aagcttccagatctagtgcatgtggcaaaactcaagggccacaaacgaggaatttggtct
gtggagttttcacctgttgataaatgtgtcttaacagcatctggagacaagacaatgaaa
atgtgggctctcgatggctcttgtttaaaaacattcgagggacatacatctagtgtactt
agagcatccttcattacacgtgggactcaatttgtttcgactggtgctgatgggctactg
aagctttggacagtaacaagtaatgaatgcattgctacttatgatgaacatgaagacaag
gtatgggccctggcaattggaaagaagacagaagtgcttgctacaggaggtggtgatgca
gttgtcaatctatggagtgattccactgctgttgataaggaagaggcttttcgtaaagag
gaagaaggggttctgcgtggtcaagagcttgaaaatgctgtatcagatgctgattatgct
aaagcaatccagattgcctttgagcttaggagacctcgtaggctctttgaacttctttca
gaactttgcagggaaaaggatgccaaagatcatatgaggaaggctcttcagactcttgga
aaggaggaagttcgacagctttttgaatatattcgagagtggaatactaagccgaagctg
tgtcacattgcacagtttgtgctttttcaggttttcagtatgctttcccctaaagaaatt
gttgaggtgaaaggcgtggcggaacttcttgaagggctcatcccttattctcagaggcac
ttcagcaggatcgatagacttgaaagaagcacattcttgttagactacactctcattggc
atgtcagttattgaacctgagtctgatagaggtgaaactagaaacagctccagaaagaaa
gtggacacagatgacagctctgatgatcgagcagcaggaaaagaacctgtgtctgaaccc
actgcggagacacagcaaaaaaagagttccaagaaacgaaaatctaagaaatctgtagag
gtttgttacaagaaggttaagttaccgggtgcagaggattcagctgtatcattgcaagcg
taa
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