Beta vulgaris (sugar beet): 104898939
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Entry
104898939 CDS
T03548
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104898939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104898939
03036 Chromosome and associated proteins [BR:
bvg03036
]
104898939
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104898939
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104898939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104898939
NCBI-ProteinID:
XP_010684376
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Position
7:complement(15998494..16014054)
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AA seq
819 aa
AA seq
DB search
MAEVGSFGTSHEFGNGSNSSNLFPSNAMGTTNLPNLPTNGSGFGGSASNIYGASLSSSIV
SSPIFSGFGQKFGTTDSSHNSFARNTIGNTSNACHIPFMTNTVGTITSPSYFSQGSTFGG
SSSGVFGASSLASSPSFMFGQGSGSSALSSISGSTTNAGCNPFASKTVGSVTVPSSSKES
LPFGGTSSSSFLTSSATCRTNEPTSLLGPFSFGSERITFNPKSVTGSDHPLQPDSQPVQM
HTIAGTRTNSYKHTIVKQELKSCKLISISAMPSYESKTHEELRWEDYKMKSGGERNLISN
QVDTQKLGLCLPSTSSLAPLSPHCISPAFFTNMNTPTFPVPCLSSSNSSPIFSTLNTKTS
ALGSSYSTSSVPPQGPNVLLTVGSGSLRSCSYSSNHSLHNPQSPSQSSGMWPSHSLGTTP
NFLVTEPPYTGSGLDQVTAGNPAYQPTIPCAHNGNLMSHMNPTPSPFTTPPISTGNNVGV
PLDVGQPQPSLQEQSFATVKVLESIIAVKDPFGSEHVITQPPIGHSACLLVPRGISSIHV
PNKSARTRVSSFLTLRHRSVKPLTINVRKYHPRSYGPKVPFFNLAEEIKDTSKAYIVPRE
NPRSVFTVSAEMSHVSTSKEEAYSLNHACAVEYEDGRSDDATKDHISNSTPNSFKDHFIE
ADNNAKYLKKSLMPKLQRSDYYTEPSIEKLASIESSNPGFCCRIKDFMVGREGYGWVKFY
GETDVRGLDLDSIIHFNNREVIVYDVAGEKPPIGEGLNKAAEVTLLNIKCIDKTGKQYTS
GKIVDKYIEKLKKLAEKQGAETVSYNPIKGEWRFSVQHF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagttggttcgtttgggacttcacacgaattcggaaatggtagcaattcgagt
aatctgtttccttctaatgcaatggggactacgaatttgccaaatttgccgaccaacggg
tcaggttttgggggtagtgcgtccaatatatatggagcatcattgtcgtcttcaatagtt
tcatccccaatattcagtgggtttggacaaaaatttggtacaaccgactcaagtcataat
tcgtttgctcgtaatacaattggtaatactagcaatgcatgtcacattccatttatgact
aatacggttgggactattacatccccaagttacttcagtcagggttcaacttttggtgga
agttcttctggtgtatttggagcttcatcattggcttcttctccatccttcatgtttgga
caaggttctggttcctctgcattgtcatcgatatctgggagtacgacaaatgcaggttgt
aatccatttgcttctaaaacagtagggagtgtaactgtcccaagttcctcgaaagagagc
ttaccttttggtggaacttcatcatcttcgtttctgacttcttccgccacctgcagaaca
aatgaacctacttctctattgggaccatttagttttggctctgaaagaatcactttcaat
ccaaaatctgttactggcagtgatcatccattgcaaccagactcgcaacctgtacaaatg
catactattgctggaactagaactaactcatataagcatactattgtaaaacaagaattg
aagagttgcaaactgatttcaatatcagccatgccttcttatgaaagtaaaacccatgaa
gaattgagatgggaagactataagatgaagtctggaggtgaacggaatttaatcagtaac
caagttgacacacagaagttaggcttatgtcttccttcaacaagttccttggccccccta
agtccacactgtatctctccagcattctttacaaatatgaatacacctacattcccagtg
ccctgtctttcgagttcaaattcatcaccaatattttctacattgaacacaaaaacatct
gctttgggttcttcatattcaacctcttctgttccgccacaaggtcccaatgtacttttg
actgtaggatcaggatcattacgaagttgctcttattcaagtaatcattcattacataat
cctcagtctcctagtcaatcttcaggaatgtggccaagtcactcattaggaacaacacct
aatttcctagtaaccgagccaccatatactggatctggacttgaccaagtcactgcaggt
aatcctgcttatcaaccaacaataccttgtgcacacaatggaaatctgatgtcccatatg
aatccaacaccatcaccctttacaacacctcccatatcaacagggaacaatgttggtgtt
ccactagatgttggtcaacctcagcctagtcttcaagaacagtcgtttgccacagtcaag
gtcctggaaagcattatagcggttaaagatccttttggatctgaacatgtaatcactcaa
ccaccaataggtcactctgcttgtttattggttccacgtggaatttctagcatacatgtg
cctaataaatctgcaagaaccagagtttcatcttttcttacattaaggcaccggtcagtc
aagccgttgacaataaacgtgagaaaatatcaccctagaagttatgggccaaaggtgcct
ttcttcaatctggctgaagaaattaaagatactagcaaggcatatatagtcccaagggag
aatcccaggtctgtgtttactgtttctgccgagatgagccatgtcagtacctccaaagaa
gaggcatattcattgaatcatgcatgtgctgtggaatacgaagatggtagatcagatgat
gctacgaaagaccatattagcaactccacgcccaactctttcaaagatcattttattgaa
gctgataacaacgcaaaatatcttaaaaagtcattgatgccaaagctccaacgctctgac
tattacacggaacccagcatcgagaagttagcatcaattgaaagctctaatccaggattt
tgctgtcgtatcaaggactttatggtgggccgagaaggctatggttgggtgaagttttac
ggggagacagatgtacgtggactcgatctggactcaatcattcacttcaataaccgagag
gtgatagtgtacgatgttgctggagagaagcctccaattggagaaggcctcaataaggca
gctgaagttactcttctaaacattaaatgcattgacaagaccggaaaacagtatactagc
gggaagatagtcgacaaatacatcgagaagctgaagaagttggctgaaaagcagggtgct
gagactgtgtcctacaatccaattaaaggtgagtggaggtttagcgtgcaacatttttag
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