KEGG   Beta vulgaris (sugar beet): 104899093
Entry
104899093         CDS       T03548                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03018  RNA degradation
bvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104899093
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104899093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvg03019]
    104899093
   03041 Spliceosome [BR:bvg03041]
    104899093
Messenger RNA biogenesis [BR:bvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104899093
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104899093
Spliceosome [BR:bvg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104899093
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 104899093
NCBI-ProteinID: XP_010684532
LinkDB
Position
7:complement(21186583..21195002)
AA seq 145 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDGPGRQTKGIGRGIDDGG
RGAGGRGRSGPGGKPGGKVPGGRGR
NT seq 438 nt   +upstreamnt  +downstreamnt
atgcttcctctgtcactactgaagacggcgcagggccaccccatgttggtggaattgaag
aatggggagacttataatgggcatttggttaactgtgatacatggatgaacattcatctt
cgtgaagtaatctgtacctctaaggatggagacaggttttggagaatgcctgaatgttat
atccggggtaatactatcaagtatctacgagtacccgatgaggtcattgacaaagtccag
gaggagaagagccgcacagataggaagcctcctggtgtagggcgtgggagaggaaggggt
agagaagatggccctgggcggcagacaaaaggcattggacgtggtattgatgatggaggt
agaggtgctggaggcagaggtcgcagtggccctggtgggaagcctggtggaaaagtacct
ggaggcagaggtcgatga

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