Beta vulgaris (sugar beet): 104899424
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Entry
104899424 CDS
T03548
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvg03036
]
104899424
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bvg04812
]
104899424
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104899424
Cytoskeleton proteins [BR:
bvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104899424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
Cnd1
PDS5
Adaptin_N
TTI1
UTP20
MMS19_C
INTS1_R4
Tti2
MMS19_N
TPR_TTI1_C
TPR_TTI1_N
RRP12_HEAT
Dopey_N
UNC45-central
VBS_C3G9
Motif
Other DBs
NCBI-GeneID:
104899424
NCBI-ProteinID:
XP_010684913
LinkDB
All DBs
Position
7:29420216..29441004
Genome browser
AA seq
1439 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRRPLTSSEVTSLVDTCIDLLKDNNFRVSQG
GLLALASAAVLSGDHLKIHFNALVPASVERLGDAKQPVRDAARRLLVTLMEVSSPTIIVE
RAGSYAWEHKSWRVREEFARTVTSAINLFASTELPLQRAILPPILHMLNDPNHSVREAAM
SCIEEMYMQIGPQFQEELQRNQLPSYMVKDINSRLERIEPKPRSSDGASSVSNVTEHKVT
NHNPKRSSPKAKNSSRETSLFGGDDVTEKPVEPVKVYSEKELIREFEKIGSTLVPEKDWS
HRIAAMQRVEALIFGGAADYPCFRGLLKQLIGPLSTQLSDRRSSIVKQACHLLNFLSKEM
LGDFEACAEQFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNA
ALRARCCDYALLVLEHWPDEPEIQRSADLYEDMIRRCVSDAVSEVRTTARSCYRMFAKTW
PDRARRLFQSFDPVIQRIINEEDGGLHRRHASPSVRERNVPITPQSSAPLHLPGYGTSAI
VAMDKTATLPSRASVSSGLLLSKSLDKGSDRSLESVLNSSKEKVSAIESLLRGLDLSSKH
NSSTVRSSSLDLGVDPPSSRDPPFPLAVPASNQVTSLSLDSKLSSVRESNNRNGGLNMSD
LYSHVHASKDAGKSSYRSGLMNEPSSTLMSYSAKRASERVQERGYMEEQSDFRDSRRYMN
SHMDRQYTETPYREATYRDSSYVPNFQXPLSRKNVTGRSTSSSRRRSFDDSHLPLGETPS
YVEGPASLHEALGEGLSPSSDWCARVAAFNYIRSLLQQGPSGIQDIAQSFEKVMKLFFKH
LDDPHHKVAQAALLTLAEIIPSCRKPFESYMERILPHVFSRLIDPKEVVRQPCTTTLDIV
GKTYGVDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHSVTPEGASNIGILKLWLGKL
APLVHDKNTKLKETAISCFISVYTHYDPTNVLIYILSLSVEEQNFLRRALKQYTPRIEVD
LMNYLQSKKERQRSKAAYDPSDMVGTSSEEGYMGVSKKTNYFGRFPANSLDGEGGRKWNS
MSDSTYLSGRTNQAVTDEMQANLYESLDTGSSNDTLSSKIKDKYIGNNAGESVGSWASRL
ENVHSSDNPGFASSPRLDINGLKKSSDSIGVDAGLQPENGFPDELATGHTKTESLKIVSN
SETGPSIPQILHSLCNGDEGGSVDSKQNAVHQLLEASVSNDPSMWSKYFNQILTAVLEVL
DDPDSSVRETVLLLIAEMLRNQKEAMEDSVEIVIEKLLHVSKDTVLKVANEAENCLTTLM
AQYDPFRCLSVIAPLLVSEDEKTLVACINCLTKLVGRLSQEELMAELPSFLPALFDAFGN
QSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGAPIDASQ
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcacttgaattagcgcgagctaaagataccaaagaaagaatggccggagtt
gaacgtcttcaccaacttctagaagcttctcgtcgtccattaacgtcttctgaagttact
tctcttgttgatacttgcatagatctccttaaagataacaatttcagagtctctcaaggt
ggacttcttgctctcgcttctgccgctgttctctctggtgaccacctcaaaattcacttc
aatgcgcttgttccggcttccgttgagcgtcttggtgatgctaaacagcctgttcgcgat
gccgccaggcgactcttggtcactcttatggaggtttcttctcctacaattattgtggaa
agagcaggttcctatgcttgggagcacaaaagctggagagttcgggaagaatttgcacgc
acagtcacgtcagcaatcaatttgtttgcatctacagagcttccactacagagggccatc
cttcctcctatattgcatatgttgaatgaccccaaccatagtgtcagggaagctgcaatg
tcctgcatcgaggagatgtatatgcagattgggccacagtttcaagaggaactacaaagg
aatcaacttccctcgtatatggtaaaagatataaattcgagattggagaggattgaacca
aagccacgatcttctgatggtgcttcttctgttagtaatgttactgaacataaggtgaca
aatcataatcctaagcggagcagtcctaaagccaagaattcttcacgagagacatctctt
ttcggaggagatgatgttacagaaaagccagtagaacctgtgaaagtttactcagaaaag
gagcttataagggaatttgagaagattggttcaacacttgttccagaaaaagattggtct
catcgtatcgcagccatgcagagagttgaagcccttatatttggaggtgcggcggattat
ccgtgttttcggggattgctgaagcaacttattggtcctttaagcacacagttatctgat
cggaggtcaagcatagtgaagcaagcttgtcatctgctaaactttttgtcaaaggagatg
ctgggggactttgaggcttgtgctgagcaatttattcctgttctatttaagcttgttgtg
ataactgtactcgtaattgcagagtctgcagataattgcatcaagacgatgttgcgtaac
tgcaaagttgcccgtgtactccctcgaatagcagattgtgctaagaacgaccgaaatgcg
gcgctgcgtgctaggtgttgtgactatgcactgttagtgctagaacactggcctgatgaa
cctgaaatacagcgatcagctgatctgtatgaagatatgattagacgttgtgtgagtgat
gcagtgagtgaggtacgaaccactgcaaggtcttgttatagaatgttcgcaaaaacttgg
ccagaccgtgctagaaggctgtttcaatcctttgatcctgttatacagaggattattaat
gaagaagatgggggtttacatagaagacacgcgtctccttctgttcgtgaaagaaatgtg
ccaattacacctcaatcatctgctcctttacatttgcctggatatggaacttctgctatt
gttgcaatggataagactgcaactttaccctcaagagcttccgtttcatcagggttgctt
ctatcaaaatctcttgataaaggatctgaccgtagtttggaaagtgtacttaattccagt
aaagagaaagtttcagcaattgaaagcttgcttagaggtctagatttgtcttcaaaacat
aattcttcgactgttcgatcatctagccttgatctaggagttgaccctccatcctctcgt
gatcctccatttcctctcgctgttcctgcttcaaatcaagtcacaagcttatcattggac
tcaaaattgtcgtcagtcagagaaagtaacaaccgcaatggtggcctaaatatgtctgac
ttgtactctcatgtacatgcttcaaaagatgctggtaaatcatcatatcgcagtggtctc
atgaatgagccatcttcaacattgatgtcgtactcggcgaagagagcttctgaaagagta
caagaaagaggctacatggaggagcaaagtgattttcgggattctaggagatacatgaac
tcacacatggaccggcaatataccgagactccctatagagaagcaacttatagagattct
agttatgtcccaaattttcagnagccactatcaagaaagaatgtcacaggcagaagtaca
tcttcgagcaggaggagaagttttgatgacagccatctgcctctaggggagacgccaagt
tatgtggaaggtcctgcttctcttcatgaggctctaggtgagggacttagtccaagttct
gactggtgtgctagagttgctgctttcaactatataaggtctctgcttcagcagggccct
agtggtattcaagacattgctcagagttttgaaaaggtgatgaaactcttttttaagcat
ttggatgatccccatcataaggtcgcacaggcagctcttttaacactagcagagataatt
ccctcttgtagaaagccttttgaaagttacatggaaaggatcttgccacatgttttctcc
aggttaattgatccaaaagaggtagttcggcagccttgtacaacaacattggatattgtg
ggtaaaacttatggggtagattctttgttgccggccttacttcgttcactggatgaacag
cgatcacctaaagcaaaattggctgtaattgaatttgcaattggttcgtttaacaaacat
tcagttactcctgaaggtgctagtaacattggcatattgaagttgtggcttggtaaactg
gctcccctagttcatgacaaaaataccaaacttaaggaaactgctatttcgtgtttcata
tcagtttatactcactatgatcccacaaatgtactgatctatattcttagcttatctgtt
gaagagcaaaatttcttgaggcgagctctcaaacaatatacgccacgtatagaagtggat
ctgatgaactatttgcagagcaagaaagagcgacagcgttcaaaggctgcttatgatcca
tccgatatggttgggacgtcttctgaggagggctatatgggagtatcaaagaaaaccaac
tattttgggagatttcctgctaattctcttgacggtgaaggaggcaggaaatggaactca
atgtcagattctacatatttaagtggtcgtaccaatcaagctgttactgacgaaatgcaa
gcaaacctgtatgagagtcttgacactggatctagtaatgatacactaagttcaaaaatc
aaagataagtatattgggaataatgctggggaaagtgtgggatcttgggctagccgattg
gaaaatgtgcacagtagtgacaatccaggttttgcgtcatctccccgtctggacatcaat
ggactaaagaagagttctgatagcattggggtagatgctggcttgcagcctgaaaatggt
ttcccagatgagctggctacgggccacacaaaaactgaatctctgaagattgtctccaac
tcagaaactggtccaagcattccacaaattctccactcactttgcaacggggatgaagga
ggctctgttgatagcaagcaaaatgctgttcatcaattacttgaagcatccgtttctaat
gatccttccatgtggagcaagtacttcaatcagattttaactgctgtacttgaggtgcta
gatgaccccgattcttccgttcgagaaactgttctattgctgattgctgaaatgctgaga
aatcagaaagaagccatggaagactctgtcgaaattgtaattgaaaagctgcttcatgtt
tcaaaggataccgttctcaaggttgccaatgaagcagagaactgcttgactaccttgatg
gcccaatatgacccatttagatgcttgagtgtgattgctcccctgttagtctccgaggat
gagaaaaccctcgttgcttgcataaattgtttgacaaagcttgtgggcaggttgtctcaa
gaagaactgatggcagagttaccctctttcttaccagctctttttgatgcatttggaaat
caaagtgctgatgtccgcaagacagtcgtattctgtctggtggacatctatatcatgctc
gggaaagcattcctgccatatctagagggacttaatagtacccaattgcgcttggtaaca
atttatgctaaccgcatctcacaagctagaacgggagcccctatagatgctagccaatga
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