Beta vulgaris (sugar beet): 104899730
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Entry
104899730 CDS
T03548
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104899730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104899730
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104899730
mRNA degradation factors
5'-3' decay
Lsm complex
104899730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
104899730
NCBI-ProteinID:
XP_010685283
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All DBs
Position
7:complement(36146031..36149877)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDLYLSTSLASYLDRKILVLLRDGRKLLGTLCSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDSEKEDLPPHMTRVSVAEIRKAQKAERDASDLKGLIRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggccggtccagaggatctgtacctttcaacttcgctcgccagttatctagac
aggaagattctagttttactgcgagatggaaggaaacttttagggacgctttgttcattt
gatcaattcgcgaatgctgttcttgaaggtgcatgtgaaagagtcatcgttggtgacctt
tattgtgacatcccattaggtttatacgtaatccgtggggaaaatgtggtattgattggt
gaattggattcagagaaagaggatctcccccctcatatgacacgtgtatcagtcgctgag
ataagaaaggcacaaaaagcagagagggatgcatccgatcttaaagggttgataagaaag
agaatggagttcctcgatatggactga
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