Beta vulgaris (sugar beet): 104899929
Help
Entry
104899929 CDS
T03548
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04142
Lysosome
bvg04144
Endocytosis
bvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104899929
04142 Lysosome
104899929
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104899929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104899929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvg04147
]
104899929
Membrane trafficking [BR:
bvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104899929
Exosome [BR:
bvg04147
]
Exosomal proteins
Proteins found in most exosomes
104899929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
104899929
NCBI-ProteinID:
XP_010685522
LinkDB
All DBs
Position
7:complement(39408197..39420585)
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPIVMKEALTLPSVGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPSQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEAKAKIKSYQMPEMVVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLISFASKTSNAGQVTS
KLHVIELGAQPGKPGFSKKQADLFFPPDFADDFPVAMQISQKYGLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEASSAGGFYAVNRRGQVLLATVNEASIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDTDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPLDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYLQALKHYTELPDVKRVIVNTHAI
EPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDGCMKLFEQFK
SYEGLYFFLGSFLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYKNNMLRYIEGYVQKVNPANAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSTDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDLVLTPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAFRVEEDAVWSQVAKAQLKEGLVSDAIE
SFIRAEDATHFLEVIKAAEDADVYHDMVKYLLMVREKVKEPRVDSELIYAYAKIDRLSEI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEYDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHSRVVDIMRKAGQLPLVKPYMVAVQSNNVSAVNEALNEIYLEEEDYDRLRESIDL
HDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDSLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVALELAWLNNMVDFAFPYLLQFIREY
TGKVDELIKAKLEAQKEVKAKEAEEKDMVAQQNMYAQLLHLALPAPPMPGMGGGAMGGGY
GPPPPMGAMGMPPMPAYGMPPMGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctaatgctcctattgttatgaaagaagctttaacgctaccaagcgtaggg
ataaatcctcagttcataactttcactcatgtaaccatggaatcggacaagtatatttgt
gtgagagagacttctcctcaaaatagtgttgtgattatcgacatgagcatgccaagtcag
cctttgagacgtcccatcacggctgattctgctttgatgaaccctaattcaagaattctc
gctcttaaagctcaacttcccgggactactcaggatcatcttcagatatttaatattgaa
gcaaaagcaaagataaagtcctatcaaatgcctgagatggttgtcttctggaaatggatt
acacctaagatgttaggcctggtcacgcagacatcagtttaccattggtcaattgaaggt
gattctgagcctgtgaaagtgttcgagcggactgcaaatctagcaaacaatcaaattatt
aattaccgatgtgatccctcggagaaatggttggttctgatcggaattgctcctggatct
cctgagaagccacaattggttaaaggaaacatgcagctgttttcagtggatcagcagcgt
agtcaagctcttgaagctcatgcagcttcatttgctcaattcaaggttcctggaaacgaa
aatccttcaactcttatttcctttgccagcaagacatctaatgctggacaggttacttca
aagttgcatgtcattgaacttggtgcccagcctgggaaacccggatttagtaagaaacaa
gcagatctcttcttccctccagattttgcagatgactttcctgtggctatgcagatatct
cagaagtatggattgatatatgtaatcacaaagctaggtcttctgtttgtatatgatctg
gagacggctagtgcggtttacagaaacaggatcagtcctgatccaatctttttgacgtct
gaagcatcctccgctggtggattttatgctgtcaacagacgaggtcaggtgttgttagcc
actgtaaatgaagcatcaattgtgccatttgttagcggtcagcttaataacctggagctt
gcagttaatcttgcaaagcgaggaaaccttcctggtgcagaaaacttggttgtccagcga
ttccaggaactgtttgctcagacaaagtacaaggaggcagctgagcttgctgcagaatct
ccgcagggcattttgcgcactcctgatactgttgccaagttccagagtgttcctgtacaa
gctgggcaaacaccaccattgctgcagtactttggaacattgttaaccaggggaaaactc
aatgcttttgagtcactggaattgtctagactagttgttaatcagaacaagaagaatctg
ttggaaaattggttggcagaggacaagcttgaatgtagtgaggagcttggagatcttgtg
aagacagtggatactgaccttgctctgaaaatatacatcaaagctagggcaactccgaag
gttgttgcagcatttgctgagaggagggagtttgataagattttgatatattcaaagcag
gttgggtacacacctgattatttgttcctcttgcaaacaatcttacggactgaccctcag
ggagctgttaattttgctttaatgatgtctcaaatggagggaggctgccctcttgactac
aatactatcacagatctgttccttcagagaaacttgattcgtgaggcaactgcattttta
ttggatgtgctcaagcccaatttaccggaacatggttatctccaaactaaagttttggaa
ataaatctagtcacgtttccgaatgtagcagatgcaatattagctaatggcatgttcagc
cattatgaccgcccacgaattgcacagctttgtgaaaagggtggcctgtatttgcaggct
ctcaagcattacactgagttaccggatgttaagcgtgtcatagtcaatacacatgctatt
gagccacaggcacttgtggagttcttcggaactctttctaaggagtgggccctggagtgc
atgaaagatcttttactggttaatctcagaggcaatctccagataattgtgcaggtcgcc
aaagaatattgtgagcaattaggcgtcgatggttgcatgaagctcttcgagcagttcaaa
tcttatgaaggactgtatttcttcttgggctcatttttaagctctagtgaggatccagaa
atccattttaagtacattgaagcagcagctaagactgggcaaattaaggaagtggaacgt
gtaactcgagaatcgaacttttatgatgctgagaaaacaaagaatttcttgatggaagca
aagcttccagatgcaaggcctctaataaatgtttgtgatcgttttgggtttgtacctgac
cttacccactacctctacaagaacaatatgctccgatacattgaaggctatgtgcaaaag
gtcaatcctgccaatgctccactagttgtagggcagctgttagatgatgagtgtcctgaa
gattttatcaaaggcctcatactctccgtgagatctcttcttcctgtagagccacttgtg
gaggagtgtgaaaaaaggaatcgcctgcgcttgctcacccagttcctggagcaccttgtt
agtgaggggagcactgatgtacatgttcacaatgctctgggcaagatcatcattgacagc
aataacaaccctgagcattttctcactactaatccttactatgattcccgtgttgtgggt
aaatattgtgagaaaagggatcctactctcgctgttgttgcatataggcgaggacagtgt
gatgaggagcttattaatgtcacaaataagaattcattattcaagctacaggccagatat
gtcgtggagagaatggatggtgacctctgggatttggtcctcactccagacaatgagtac
aggcggcaattaatagatcaagttgtttcaactgctttgcctgaaagcaagagccctgag
caggtttctgctgctgttaaagcctttatgacagctgatcttcctcatgagctgattgag
cttcttgaaaagattgtgcttcaaaactctgctttcagtggaaacttcaatttgcaaaat
ctacttatacttactgctatcaaggcagattcttcaagagttatggattacatcaatagg
ttggacaactttgatggacctgcagttggagaagtggcagtggaagcacagttgtatgag
gaagcatttgcgatctttaagaaatttaacttaaatgtccaggctgtgaacgtgctgctg
gacaatatccgcaatatcgaccgggctgtggagtttgcatttcgtgttgaagaggatgct
gtatggagtcaggttgccaaggcccaactcaaggaaggtctagtgagtgatgcaattgag
tcatttatccgggctgaggatgccacccatttcttggaagttattaaagcagctgaggat
gcagatgtttaccatgacatggtgaaataccttctgatggttagggagaaggtcaaggaa
cccagggttgacagtgaacttatatacgcatacgcgaaaattgatagacttagtgaaatt
gaagagttcatacttatgcccaatgttgccaatcttcaaaccgttggagatcgtctatat
gatgaagctttatatgaggcagcaaagatcatatacgcattcatttctaactgggctaag
ctggctgttactcttgtgaaattaaagcagttccaaggtgctgttgatgcagctcgtaag
gctaacagcgcaaagacttggaaggaagtttgttttgcttgtgtggatgctgaggagttc
cgattggctcagatatgtggtcttaatgtcatcatacaggttgatgatctggaagaggtc
agtgaattctatcaaaacaggggatgctttaacgagctcatttctcttatggaaagtgga
ttgggattggaacgtgcacatatgggtatcttcactgagttgggagttctctatgctaga
taccgccctgagaagctcatggagcatattaaactgttttcaacccgtcttaacatacca
aagctgattagagcttgcgatgagcaacagcattggaaggaacttacttatttgtatata
caatatgacgagtatgacaatgctgccaccactgtaatgaatcattctccagaagcatgg
gatcacatgcagttcaaagacattattgttaaggttgcaagtgtggagctttactataag
gctgtacacttctacttgcaagaacatcctgatcttattaatgacatgctcaatgttctt
gcacttcgtgtggatcactcacgtgttgttgacatcatgagaaaggccgggcaacttcct
cttgtgaagccgtatatggtagctgtccaaagcaacaatgtatctgctgttaatgaagct
ttgaatgagatctatctcgaggaagaagactatgataggcttcgtgagtccatagactta
catgacaactttgaccagataggtcttgcccagaaggtggagaaacatgagttgctagaa
atgagacgtattgcagcttacatatacaagaaggccggcagatggaagcagtccatcgca
ttgtcaaagaaagacagtctttacaaggatgcaatggagactgcttctcaatctggtgat
cgtgaacttgcagaggagttgcttgtgtatttcattgagcagggaaagaaagagtgcttt
gcatcatgtctttttgtgtgttacgatttaatcagagctgatgttgcattggagctggca
tggttgaacaatatggttgactttgccttcccgtatctcttacagtttattcgagaatac
acgggcaaggtggatgagctgattaaagcaaaacttgaagctcagaaggaggttaaagca
aaagaagcagaggagaaagatatggttgcacaacagaatatgtatgcacagttgctgcat
cttgctttaccagctccaccgatgcctggaatgggaggaggtgcaatgggtggtggctat
ggtcctcctccacctatgggcgcgatgggcatgcctccaatgcctgcttatggcatgcca
ccaatgggctcatactaa
DBGET
integrated database retrieval system