Beta vulgaris (sugar beet): 104900057
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Entry
104900057 CDS
T03548
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104900057
03015 mRNA surveillance pathway
104900057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104900057
03041 Spliceosome [BR:
bvg03041
]
104900057
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104900057
Spliceosome [BR:
bvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104900057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
104900057
NCBI-ProteinID:
XP_010685690
LinkDB
All DBs
Position
7:complement(40746649..40754686)
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AA seq
888 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFAAELEHLVDITKVKMDVIKPWIAKRVTEFL
EGFEDELLINFIYGLLEGKEVNGKQVQIQLTGFMEKNTGKFMKELWALLLSAQNNASGVP
QQFLDAKEEETRKKKEENDRIFDEIQRRKEKEAKESEQEKERQMDDGLDKNSTEESNRRR
ERGLAVQSGDENGANVRNGFRGRSRASKSPSDRSQSPHRERSISRSISGSPREKKRSVSL
ERRHRSPRRSVSPRGQSVRQSVSPRRRSHSRRRSSSRTRYRSPSPMRRRVRSPVRRRSRS
PLRRLSPSPTKRSPSPLRRTSPSPLRRRSPSPLRRRSPLRRRSPPRRRRSPSPWRRRSPS
PGRHRSPSPVRRRRRRSTSSPRSRSPVQRRPPSPIRRRFQSPVRRSSYPVRRRSPSPAQR
RSPSPARRRSPSPARRRPPLPRGRRSLSPVEHRSLSPVRRRSPVPARRRSPTASPSRSPS
LASRSSGSPVRRSSASPAKMRSPGLQKSPSGSPRERNRIQEPAIMARKHLISLSPQRDNS
NRKHSQRKEPSMSPPPQKSPYAVPPQNRTRSSGEDTRLASSYGSSGNKAGEKITLNVSRS
PTRVRDQIVHHDSPVSSEERSRKDREYEDKLKLEERKPARSSGGKRKESPKRPASYQNRD
TADARREDAEMLSEEASLKEVRAAKNSPRRGSLSGERSEVLYPGDVSKLDGTRNSQQKDV
RDNTLSDSLVSPHKKCRSPSVDSDSGSEESGKHRAVSEKRKHRRSRRREVASDDSSSESE
MEDRKEAKRKKKEEKKLRKEERRRRREGRRQRKEEKRASKRRRKSKDVDALSSDVENNEK
DVNASNGERRSRKYSSDEGEMESQKKKLEIELRERALESLRAKKGISR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtttctttcggggtacatcggccgagcaagatactcgattttcaaataag
caagcgaagttgttgaaaacgcagaagttcgcagctgaactcgaacatttggttgatatt
acgaaagtgaaaatggacgtcattaagccttggattgctaagagagtgaccgaatttctt
gaaggatttgaagatgaattgctcattaacttcatctatggtcttcttgaaggaaaggag
gttaatggaaagcaggtccagattcaactaactggtttcatggaaaagaatactggtaaa
ttcatgaaagagctttgggcccttcttctcagtgcccagaataatgctagtggtgttccc
caacagttcctggatgctaaggaggaggaaactaggaagaaaaaggaagaaaatgatcgt
atctttgatgaaatccagagaaggaaagagaaggaagctaaagaatctgagcaagagaag
gagaggcaaatggatgatgggcttgacaaaaattctactgaggaatcaaatagaagaaga
gaacgaggtcttgctgtgcaatctggagacgagaatggagctaatgtgagaaatggtttt
agaggaagatccagggcatccaagtcaccttctgatcgttcccagtcacctcatcgagaa
agaagtatttcaaggagcatctctggttctcctagggaaaaaaagcgatcagtttctctt
gaaaggagacaccgttcgccccgaagatctgtcagtcctaggggacagtctgtccgacag
tccgtatctccaagacggaggtctcattctagaaggcgatcttcatcacgtacgcgttat
agatctccatctcctatgaggcgtagagttcgctccccagtacgtagaaggtcacggtca
ccccttcggcgcctatcaccttctccaaccaagaggtcaccttctcccttaaggcgtaca
tcaccttctcccttaaggcgccggtcaccttctcccttaaggcgtcggtcacctttacgg
cgtcggtctcctcctaggcggcggcgttcaccctctccttggcgtagacgatcaccatct
cctgggcgacaccgatccccttctcctgttcgccgtcgtaggaggagatccacttcaagt
ccgaggtccagatctccagttcagcgtaggcctccttctcctattcgacgtcgattccaa
tctcctgtcagaaggtcttcctatccagtccgacgtaggtctccatctcctgctcaacgt
aggtctccatctcctgctcgacggaggtctccttcgcctgctcgacgtcggcccccattg
ccaaggggacgtagatctctatctcctgttgagcatagatctctatctcctgttcggcgc
aggtcacctgttccagcacgtaggagatcaccaactgcatctccaagcaggtctccttca
cttgccagtcgaagttctgggtcacccgtcaggcgtagttctgcttcaccagctaaaatg
agatcacccgggcttcagaaatcccccagtggatctcccagagaaagaaacagaattcag
gagcctgcaatcatggcacgtaagcaccttatttcactgtcaccccagagagataattcg
aatagaaaacattcacagagaaaagagccatctatgtcacctccaccacagaagtctccc
tatgcggtgccaccacaaaaccgtactaggagctctggtgaagatacgaggttggccagc
tcatatggcagttctggaaataaagctggggagaaaattactcttaatgtaagtcgaagt
cctactagagtgagagaccaaatagttcatcatgacagcccagtatcaagtgaagagaga
tctcgaaaagacagggagtatgaggataagttgaagttagaagaaagaaaacctgcacgc
tcatccggtggcaagcgaaaggagtctcctaaacggcctgccagctatcaaaatcgtgac
actgctgatgcaagacgggaggatgctgagatgttgagtgaagaggcttctctgaaggaa
gtccgtgctgcaaaaaactcaccacgtagaggttctctgtcgggtgagaggtctgaagta
ttatatcctggggatgtttccaagttggacgggacgagaaactcccaacagaaagatgtt
agggacaacaccttgtctgactccttagtgagtccacataaaaaatgcagaagtcctagt
gtcgattctgattctggatctgaggaaagtgggaagcatagagcggtttctgaaaagagg
aagcatagaaggtcaaggcgacgagaggtagcgtcggatgattctagttctgaatctgag
atggaggatagaaaggaagctaaaagaaaaaagaaagaagagaagaaattacgtaaagag
gagcgacgtaggcgccgtgaggggaggcgtcagaggaaagaggaaaagcgagctagtaaa
cgaaggcgaaagtccaaagatgttgatgctttgtcttctgatgtggaaaacaatgagaag
gatgtcaatgcttccaatggtgaacgtcgttcaaggaagtattcaagtgatgaaggagag
atggaatcgcaaaaaaagaagcttgagattgagctacgtgaaagggctcttgagtcactg
agagcaaagaaaggcattagtcgttaa
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