Beta vulgaris (sugar beet): 104900267
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Entry
104900267 CDS
T03548
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvg03016
]
104900267
Enzymes [BR:
bvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104900267
Transfer RNA biogenesis [BR:
bvg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104900267
Prokaryotic type
104900267
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
104900267
NCBI-ProteinID:
XP_010685952
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All DBs
Position
7:complement(42973660..42985559)
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AA seq
539 aa
AA seq
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MAVWSLRLPLTNLSRTSNGSINGRLKPFSHPSTFSFSFSNHPIRLNILLLAQYSSTTSSS
STISAFSQTQTQIQTQIHELIDSPLKWEAFRKKKVVMRVGYVGTNYKGLQKQREDNIRTI
EEALENAIYKAGGIQDSNYGNLNKIAWARSSRTDKGVHSLATTISLKLEIPKDAWMNDPN
GLVLADHVNSHLPDDIRVFSILPSQRSFDPRRECHVRNYTYLLPAEIIGITSHSTTSEID
YHIKDFNEILNYFEGDHPYHNYTARSKYRRKPPKGRANRRHKSPNNTPPVEVEENHADCQ
LSVDEVDTLSDEELITNPSDNSDSDEQFDSEDGQGGESGKKNSIEVVRARWLHECDEADR
LSAAHWRKIFQCSCGKLDRSLEMSFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDII
KLSLNKFSRIVLPLAPSEVLVLRGNDFRLRKQPGNKKRPEMHILVDSKEINSVVDKFFAT
VLLTQLSKFLDPSESPWKDWLEILDANVSIPESQLDEVRNAWNVWNEGFQNRILPKKEN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatggtctctacgtctaccattaacaaacctctcaagaactagtaatggtagc
attaatggcagacttaaacccttttcacatccctctactttctctttctccttctccaac
catccaattcgcttaaacatactactacttgctcaatattcctccactacttcatcatca
tctacaatctctgctttttctcaaactcaaacgcaaattcaaactcaaattcatgaatta
atcgattctccattgaaatgggaagcttttcggaagaagaaagttgttatgcgcgttggt
tatgttggtactaactacaaaggtttgcagaagcaacgagaggataatattcgtaccatt
gaagaagccttggaaaacgccatttacaaagcgggtggcatccaggatagcaattatggt
aacttgaacaaaattgcatgggccagaagtagccgaactgataaaggagttcactcactg
gccactacaatatctttgaagttggaaatccctaaagatgcgtggatgaatgatcccaat
ggtcttgttcttgcagaccatgttaactctcatcttcctgatgatatcagagtgtttagt
atattgccttctcaaaggagctttgatcctcggcgggaatgtcatgtccgaaattatact
tacctccttccggctgaaattattggaataacaagccactccaccacttctgaaatcgac
tatcatataaaagattttaacgagattctgaactatttcgagggagaccacccttatcat
aattacacggccaggtcaaagtaccgaagaaaaccaccaaaaggtcgtgcaaatcgaaga
cacaaatcacctaataacacaccacctgttgaggttgaggaaaatcatgctgattgtcaa
ttgtcagttgatgaggttgatacattgagtgatgaagaattgatcactaatccttcagac
aacagtgattctgatgagcagtttgattctgaggatgggcaagggggcgagtcaggaaag
aaaaactcaattgaagttgttcgtgctagatggcttcatgagtgtgatgaagcggacagg
ctcagtgctgctcactggaggaaaatattccagtgttcttgtggcaagttggatcggtca
cttgagatgagtttcgtggagctctctatatgtggggagtctttcatgctgcatcaaatt
cgcaaaatggttggcaccgctatagcagttaaacgtggattgttccccagagatattatc
aagttgtcactcaacaagttttcaaggattgtcctacctcttgctccttcagaagtttta
gttttgagaggaaatgactttagattgagaaagcagcctgggaataaaaaaaggccggag
atgcacatcttagtcgattccaaagaaattaacagtgtagttgataaattctttgcaact
gtactgctaactcagttgtctaagtttttggacccttctgaatctccctggaaagactgg
cttgagattttggatgccaatgtgagcataccagaatcacagttggatgaagtcagaaat
gcctggaatgtttggaatgaaggattccaaaacaggattcttccgaaaaaagaaaactga
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