Beta vulgaris (sugar beet): 104900589
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Entry
104900589 CDS
T03548
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104900589
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104900589
Spliceosome [BR:
bvg03041
]
Complex C
Other components
Complex C specific factors
104900589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
AAA_11
T2SSE
Cas3-like_C_2
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
104900589
NCBI-ProteinID:
XP_010686351
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All DBs
Position
8:complement(1606044..1631455)
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AA seq
702 aa
AA seq
DB search
MAKFWKPGTEKPRLVEDEDGGVLFFYSSNSSSSSSGFGYANNINNQRQRLPVYKRRDAIL
FLVETHATTIVVGETGSGKTTQIPQYLNEAGWSDGGRVIACTQPRRLAVQSVASRIAEEM
GVKLGEEVGYVIRFEDVTTSGVTKIKFLTDGVLLREMMDDPLLSKYSVIMVDEAHERSIS
TDIVLGLLKKIQRRRPELRLIISSATIEAKSIASFFRVSKKVREGTGDGLGPKTEPAIIS
VEGRGFTVEVNYVQEPVADYLQAAVSTVQLIHKQQPIGDILVFLTGQDDIDAAVQLLNEE
AHSSDRNTGELLVLPLYSGLSRAEQDLIFSPTPRGKRKVIISTNIAETSLTLEGVVYVVD
SGFSKQRFYDPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYYVNEMSAEG
IPEIQRSNLVSCVIQLKALGIDKILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSP
TGFQLAEIPLDPMLSKAILASSELGCSEEMLTIGAVLSVQSIWISVKGAKKQLDEAKLRF
AAAEGDHVTFLNVYKGFLQSGKSSKWCHKNFINYHAMKKVLETREQLKRTAKRLGIVLKS
CDRDIQDVRKAITAGFFANACQLEPYSHEGKYKTIRTSQDVYIHPSSVLFRVNPKWVVYH
SLVSTDRRYMRNVVTIDPSWLVEAAPHYYQYQGPGPIGTLTR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttctggaaacctggaactgaaaaacctcgacttgtagaagacgaagatggc
ggagttctattcttctactcctccaattcttcttcctcatcttctggtttcggatacgcc
aataacatcaacaatcagcgtcaaagactacctgtatataagcgcagagacgctattctc
tttctcgtcgaaactcacgccactaccattgttgtcggcgaaactggcagtggaaaaact
actcaaattcctcagtatttgaatgaagcaggatggtctgatggtggtcgtgttattgct
tgcactcaacctcgacgtcttgctgttcagtcagttgcttcaaggattgcagaagaaatg
ggtgttaaacttggtgaggaggttggttatgtaatcagatttgaagatgtaacaacctcg
ggtgttactaagatcaagttccttacggatggagtgttgctgagggaaatgatggatgat
cctcttctgtccaaatacagcgtcattatggtagatgaagcacatgaacggtctatttca
actgatattgtgctgggtctcttaaagaagattcagaggcgtaggcctgaactacgttta
atcatctcatctgcaactattgaagcaaaatccattgcatctttcttcagagtcagtaag
aaggttcgagaaggaactggcgacggacttggccctaagacagaacctgccattatttca
gttgagggaagaggctttactgtggaagtcaactatgttcaggagcctgttgcagactat
cttcaagctgctgtttcaactgttcagttgattcacaaacagcaaccaattggtgatatt
cttgtatttcttacgggtcaagatgatatagatgctgcagttcaactgcttaatgaagaa
gctcatagttctgacagaaacactggagaattgcttgttctgcctttgtactctggactt
tcacgtgcagagcaggacttaattttttcccctactcctagagggaaaaggaaggttatc
atatcaacaaatattgctgagacatcattgaccttggagggggtagtctatgttgtagat
agtggtttctcgaaacagagattttatgatccaatatcagacattgagaatttggtggtg
gcccccatatcaaaggcttctgcaagacaaagggcaggtagggctggaagagtgagacct
gggaagtgttacaggctatacacagaggagtattatgttaatgaaatgtcagctgagggg
attcctgagatacagaggtcaaaccttgtctcttgcgttatacaactaaaggctctagga
attgataagattctgggatttgattggcctgcatcaccgtcaccagaagctatgattaga
gctcttgaagtattgtactccctaggtgttcttgatgacgatgccaagctcacttcacct
acaggcttccagcttgctgagattccactggatcctatgctctcaaaagctatacttgca
tctagtgaattagggtgttcagaggagatgcttactataggagcggttctttctgtacag
tcaatctggatctctgtcaaaggagcaaaaaagcagctggatgaagccaagctccgtttt
gctgctgctgagggtgaccatgtaacttttctaaatgtatacaaaggatttttgcagtct
ggtaaatcatcaaaatggtgtcataagaactttataaactatcatgctatgaaaaaagtt
cttgagactagggaacaactcaaaagaacagcaaaacggctaggcatagtcttaaaatct
tgtgacagagacatacaggatgtaaggaaggcaataactgctggattttttgccaatgct
tgtcagttggaaccatacagccatgaagggaaatacaagaccatcaggacttctcaggat
gtttatatccacccttcatctgttttgttcagagtaaacccaaagtgggttgtataccat
tctcttgtctcaactgatcgccgatacatgcgtaatgtcgtgacaatagatccttcatgg
ttagtcgaggctgctccacattattatcagtaccaagggcctggtccaattggtactttg
actaggtag
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