Beta vulgaris (sugar beet): 104901384
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Entry
104901384 CDS
T03548
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104901384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104901384
03009 Ribosome biogenesis [BR:
bvg03009
]
104901384
04131 Membrane trafficking [BR:
bvg04131
]
104901384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvg04147
]
104901384
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104901384
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104901384
Membrane trafficking [BR:
bvg04131
]
SNARE
SNARE associated proteins
Others
104901384
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104901384
Exosome [BR:
bvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104901384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_16
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_18
nSTAND_NTPase5
ABC_tran
NB-ARC
AAA_7
Viral_helicase1
Vps4_C
NACHT
TsaE
IstB_IS21
DUF815
AAA_lid_PRS2_C
Zeta_toxin
AAA_24
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
104901384
NCBI-ProteinID:
XP_010687252
LinkDB
All DBs
Position
8:20786138..20795265
Genome browser
AA seq
804 aa
AA seq
DB search
MADNAESSDKGSKRDYSTAILERKKSPNRLVVDEAVNDDNSVVSMHPDTMEKLQLFRGDT
VLVKGKKRKDTICIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHI
LPIDDTIEGVTGNLFDAYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPPEYCVV
APDTEIYCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEILRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGQSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSVGDAGGAA
DRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRYSIF
KAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRGRDNP
EAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSNT
STGTAGTDTFAASAGGADEDDLYS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgctgaatcatccgataagggctcaaaaagagattacagtactgcaatt
cttgagcgcaagaagtctccaaatcgattggttgtcgatgaagccgttaatgatgacaat
tcagttgtttctatgcatcctgacaccatggaaaaacttcagctctttcgtggtgatact
gttttagtcaagggaaagaaaaggaaagacacaatctgcattgcccttgctgacgagact
tgtgaagaaccaaagattaggatgaacaaggttgtgagatctaatttaagggttcgtctt
ggtgacgtggtctctgtccaccaatgtcctgatgtgaaatatgggaaacgtgtccatatt
cttcctattgatgataccattgagggtgtcactggaaatctgtttgatgcataccttaaa
ccatattttcttgaagcgtaccggccactgaggaaaggagacctttttcttgtgagaggg
gggatgagaagtgtcgaatttaaggttattgagactgatcctcctgaatattgtgtggtt
gccccggatactgaaatttattgtgagggtgagccagttaaacgagaagatgagaatcga
ttagatgaggttggttatgatgatgttggtggtgtgaggaaacagatggcccagattagg
gagctggtagaacttccgttaagacacccacagttgtttaaatctattggtgtgaagcca
cctaagggaattttgctttatggacctcctgggtcaggaaagactttgatagcacgagct
gtggcaaatgaaactggtgcattcttcttttgtatcaatgggccagagatcatgtcaaaa
ttggcgggggaaagtgaaagcaatcttaggaaagctttcgaggaagctgagaagaacgcg
ccatccatcatttttattgatgaaattgattcaattgctcccaagcgagagaaaaccaat
ggagaggtggagaggcgtattgtttcccagctattgactcttatggatgggcttaaatca
cgagcacatgttattgttatgggtgctactaatcgtccaaacagcattgaccctgcacta
agaaggtttggtcgatttgacagagaaatagatattggtgttccagatgaagtagggaga
cttgagattctacgcattcacacaaaaaacatgaagctttctgatgatgttgatttggaa
agaatatccaaggacacacatggttatgttggtgctgatctagctgccttatgtactgaa
gctgcacttcaatgtatcagagagaagatggatgtaattgatctggaagatgagactatt
gatgctgagatccttaactccatggctgtttcaaatgaacacttccagactgctcttgga
cagagcaatccatctgctctgcgtgaaacggttgttgaagttccgaatgtctcttgggag
gacattggtggccttgaaaatgtcaaaagggaacttcaagagactgttcaatatcctgtg
gagcatcctgagaaattcgaaaaatttgggatgtctccttctaagggagttctattttat
ggacctcctggatgtggaaagactttgctggcgaaggctattgccaatgagtgtcaggct
aacttcattagtgtgaaaggtcctgaattgctaacaatgtggtttggtgagagtgaggct
aatgttcgagagatttttgacaaggcccgccagtcagctccatgtgttctattctttgat
gagcttgattcaattgcaactcagaggggaggcagtgttggcgatgcaggtggcgctgct
gacagggttttgaaccaacttttgacagaaatggatggcatgtctgccaaaaagactgtt
ttcataattggagccacaaatagacctgatattattgattcagctcttctgagaccaggg
cgtcttgatcaactcatttatattcctcttccagatgaggattcccgttattccatattt
aaggctgccttgaggaaatcacctattgccaaagatgttgatatcagagcacttgcaaag
tacactcagggatttagtggtgcagatatcactgaaatatgtcagcgggcttgcaaatat
gccatcagagaaaacattgagaaggatattgaaagagagagaaggggaagagataaccct
gaggccatggaggaggatgtggaggatgaggttgctgaaatcaaggctgcacattttgaa
gaatctatgaaatatgcccgcagaagtgtcagcgatgctgatattcgcaagtatcaggcc
tttgctcagactttgcagcagtcaagagggtttggcagtgagttccgtttctccaataca
tccactgggactgcaggtacagatacttttgctgcgtctgctggtggagctgatgaagat
gacctctatagctag
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