KEGG   Beta vulgaris (sugar beet): 104902510
Entry
104902510         CDS       T03548                                 
Symbol
LOC104902510
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
  KO
K15171  transcription elongation factor SPT4
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104902510 (LOC104902510)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvg03021]
    104902510 (LOC104902510)
   03019 Messenger RNA biogenesis [BR:bvg03019]
    104902510 (LOC104902510)
Transcription machinery [BR:bvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     104902510 (LOC104902510)
  RNA polymerase I system
     104902510 (LOC104902510)
Messenger RNA biogenesis [BR:bvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     104902510 (LOC104902510)
SSDB
Motif
Pfam: Spt4 PylS_N
Other DBs
NCBI-GeneID: 104902510
NCBI-ProteinID: XP_010688603
LinkDB
Position
9:complement(270240..274670)
AA seq 114 aa
MGSVAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFGLDKDHERVVECTTPNFTG
LISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEEFQAICEDERVQYVPPKR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgggaagcgtggcacaaataccaacgagctttgggcatgaacttagagcttgccttcgc
tgcaggcttgtcaaaacctacgatcagtttagagaatcaggatgcgaaaactgtcccttc
tttggtttggataaagatcatgagcgtgttgttgagtgcactactcctaatttcactggg
ttaatttctgttatggatccaactagaagctgggctgctcgctggctacgaattggcaga
ttcgttccaggctgctacactcttgctgtatcggaggcacttccagaggaattccaggct
atttgcgaggatgagcgtgttcagtatgtacctccaaagcgctga

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