Beta vulgaris (sugar beet): 104903922
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Entry
104903922 CDS
T03548
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03082
ATP-dependent chromatin remodeling
bvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104903922
03083 Polycomb repressive complex
104903922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvg03036
]
104903922
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104903922
Histone modification proteins
HAT complexes
HATB complex
104903922
HDAC complexes
Sin3A-HDAC complex
104903922
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104903922
PRC2.2
104903922
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104903922
Heterochromatin formation proteins
Other heterochromatin formation proteins
104903922
Chromatin remodeling factors
NuRD complex
104903922
NuRF complex
104903922
NuRF complex (fruit fly)
104903922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
104903922
NCBI-ProteinID:
XP_010690365
LinkDB
All DBs
Position
9:33639977..33643466
Genome browser
AA seq
393 aa
AA seq
DB search
MAEEEETPLTEEQLNEEFQVWKKNTPILYDVVLCHPLEWPSLTVQCVPSSPHINPDSSLA
VHQLILGTHTSDDSPNFLMVADSHLPSNNGTSSSVPKVEIVKKFHVDGEVNRARCMPQKP
NLVATKTSGLEVYVFDVSKEPSLECDPDLILRGHEKEGYGLSWNPLKEGCLLSGSYDCNI
CLWDVSYMPESKVLDSMSVFKAHESIVEHVAWHAKNENLFGSVGDDGRLMIWDLRSDDKP
QHSVIAHEKEVNYLSFNSFNEWIVATASSDTTIGLFDMRKLAAPVHFLSSHTEEVFQVEW
DPNHETVLASSSDDRRLMVWDLNKVGDEQLEGEAQDGPPELLFSHGGHKAKISDFSWNKN
EPWMISSVADDNTLQIWQMAKSIYRDEDDMPAE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagaagaaacgccgttgacggaggagcagttaaacgaagagtttcaagta
tggaagaagaacactccaattctctacgacgtcgttctttgtcatcctctagaatggcca
tctctcactgttcaatgtgttccatcatcaccccatatcaatccagattcatctctagcc
gtccatcaacttattcttgggacccacacttctgatgactcccctaacttcctcatggtc
gccgattctcaccttccctccaacaatggcacatcttcttctgttcccaaggtggagata
gtgaagaagtttcatgtagatggggaggttaaccgagccagatgtatgccgcaaaagccg
aatcttgtcgcgacgaagacgagtggtttggaggtgtatgtttttgatgtttcgaaggaa
ccgagcttggagtgtgatcctgatttgatattgagaggtcatgagaaggaagggtatggg
ctttcatggaatccattgaaagagggttgtttgttgagtggttcatatgattgtaacatt
tgtttgtgggatgtgtcctacatgcctgaaagtaaagttcttgattccatgagtgttttc
aaggctcatgagagtatagttgaacatgtagcttggcatgcaaagaatgaaaacttgttt
ggctcagtgggggatgatggaaggttgatgatttgggatttgcggtccgatgataagccg
caacattctgtcatagctcatgaaaaggaggtgaattatctatctttcaactcatttaac
gaatggattgtggcgacagcttcatcagataccaccattggactgtttgatatgcggaag
ctggccgcacctgtgcatttcttgtctagtcacacggaagaagttttccaggttgaatgg
gatccgaatcatgagactgtgttggcatcatcttctgatgacagaaggttgatggtttgg
gaccttaacaaagttggtgatgagcagttggagggagaagcacaagacgggccgccagaa
ctccttttctctcatggaggacataaggctaagatatcggatttctcgtggaacaagaat
gaaccttggatgatatcgagtgtggcagatgacaacacattacagatttggcaaatggct
aagagtatataccgtgatgaggatgatatgccagctgaatga
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