Beta vulgaris (sugar beet): 104904291
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Entry
104904291 CDS
T03548
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104904291
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvg04147
]
104904291
Membrane trafficking [BR:
bvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104904291
Exosome [BR:
bvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104904291
Exosomal proteins of bladder cancer cells
104904291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Fis1_TPR_C
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD_LRWD1
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
104904291
NCBI-ProteinID:
XP_010690807
LinkDB
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Position
9:37227420..37235359
Genome browser
AA seq
1220 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLLR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREQDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGESMFYAKDRFLRFFEFSTQRDTQVIPIRRPG
TASLNQGPRTLSYSPTENAVLVCSDVDGGSYELYVVPKDVFGKGDVAQEAKRGIGGSAVF
IARNRFAVLDKSNNQVLIKNLKNEIVKKSVLPIATDAIFYAGTGNLLCRAEDKVVIFDLQ
QRLVIGELQTPFVKYVVWSNDLESVALLSKHAIVIASKKLVHQCTLHETIRVKSGSWDDN
GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGNTIFCLDRDGKNKAIVIDATEYI
FKLSLMRKRYDHVMNMIKSSQLVGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDYWYRLGVEALRQGNTAIVEYAYQRTKNFERLSFLYLMTGNVEKSNK
MLKIAEVKNDVMGQFHNALYLGDVEERVKILESAGHLPLAYITASVHGLHDVAERLATEL
GDDIPSLPEGKVPSLLIPPAPVMCAGDWPLLRVMKGIFQSDFDGGDRGGAEDEDEAEANW
GEDLDMIHINDDENVENGDTAEDLDDADVADDNGEQGGWDLEDLDLPPEVDTPKASVSTR
SAIFVAPAPGMPVSQIWTQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKPMFLDLH
NGSHSYLRAFASAPVISVALERGWTESASPNVRSPPALVFSFSQSEEKLKAGYKATTAGK
FSDALRIFLGILHTIPLIVVESRREVDEVKELIVIVKEYVLGLKMETKRRELKDDPKRQQ
ELAAYFTHINLQIPHLRLALQNAMTVCYKAKNFNTAATFARRLLETNPTNEQQAKLSRQV
IQAAEKNMNDAVELDYDFRNPFVVCGATYVPIYRGQKDVSCPYCSARFVPGLEGQICNVC
ELAVIGADASGLLCSPSQVR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacaaagagtaatagggtcaagggactcagttttcatacaaag
aggccatggatcttggcgagtcttcacagtggtgtgatccagttatgggattacagaatg
ggtacacttattgatcgatttgatgagcatgatggccctgttcgtggtgttcatttccat
aaatctcagccactgtttgtgtcaggaggtgacgattacaagattaaagtttggaattat
aaacttcaccggtgtctttttacactacttggacatcttgattacattcgtacagtgcag
tttcaccatgagagcccatggattgtgagtgccagtgatgaccagactattcgcatatgg
aattggcagtcacggacatgtatctctgtcttgacaggacataaccattatgttatgtgt
gcctcatttcatcctaaagaagaccttgttgtgtcggcctcccttgatcagactgttcgg
gtctgggatattggagcgctaaaaaagaaaagtgcgtctcctgcagatgacctattgcgg
ttgagtcagatgaatactgatctttttggtggtgttgatgccgtggtcaagtatgtcttg
gaaggtcatgataggggggttaattgggctgcatttcatcctacccttcccttgattgtt
tctggagctgatgatcgccaagtgaaattatggcgtatgaatgatacaaaagcttgggag
gtggacactttgaggggacacatgaacaatgtctcctgtgttatgttccatgccaaacaa
gatattatcgtttcaaattcggaagacaaaagtattcgtgtatgggatgtaacaaagagg
accggcattcaaacattccgtcgggagcaagatagattttggattcttgcagctcatcct
gagatgaatctcctagctgctggccatgacagtgggatgattgtcttcaaattggagaga
gagcgtcctgcattttctgtgagtggtgaaagcatgttctatgcgaaagaccgttttctg
cgttttttcgaattttcaactcagcgagatacccaagttatcccgattcgccggcctgga
accgcaagcttgaatcagggtcctaggactctttcctatagtcctacagagaatgcggtc
cttgtatgctctgatgttgatggtggatcttatgagctttacgttgtaccaaaggatgtg
tttggcaagggtgatgtggctcaagaggcaaaaagaggtattggaggatctgctgttttt
atcgctcgtaacaggtttgcagtgcttgataaaagcaacaaccaagtgctaatcaagaat
cttaaaaatgagatcgtgaaaaagagtgtcctccctattgccactgatgcaatattctat
gctggtactggtaatttgctctgtagggcagaagataaggttgttatttttgaccttcaa
caaaggcttgttattggtgaacttcaaaccccttttgtcaagtatgttgtctggtcaaat
gacttggagagtgttgctttgctgagcaaacatgctatagtgattgcaagtaaaaagctt
gtgcatcagtgcactcttcatgagacaattcgagttaagagtggatcctgggatgataat
ggagtcttcatctatacaactttaaaccacatcaagtattgccttcctaatggagatagt
ggcataattaaaacgcttgatgtgcctatatatatcaccaaagtatctggaaatacaatt
ttttgcctggatcgggacggaaagaacaaggccatagttattgatgcaacagagtatata
ttcaagctatctctgatgaggaagaggtatgaccatgttatgaacatgataaaaagctcc
caactcgtggggcaggcaatgatagcttatctgcagcagaaaggatttcctgaagttgct
ctgcattttgtaaaagatgaaaggactcgttttaatttagctctggagagtggaaatatt
caaattgccgttgcttcagcgaaggaaattgatgaaaaggattactggtatagactaggg
gtggaggctcttcgccagggtaacacagctattgttgaatatgcataccagaggaccaaa
aattttgagagattgtcgttcctctatcttatgacagggaatgtggagaagtcgaacaaa
atgttgaaaattgcagaggtaaagaatgatgtcatgggtcaatttcataatgccctttat
ttgggtgatgtggaggagcgtgtgaagattttggaaagtgctgggcatttgcccctggct
tacatcacagcttcagtccacgggctgcatgatgttgctgagaggctagctacggagttg
ggagatgatattccctccttgcctgaaggtaaggtgccctcccttttgatacctccagca
cctgtcatgtgtgctggcgattggcccctgttgagagtgatgaaggggatctttcagagt
gattttgatggtggtgacaggggtggtgctgaagatgaagacgaggctgaggccaattgg
ggtgaagatttggatatgattcatataaacgatgatgagaatgtagaaaatggagacact
gcagaagatttggatgatgcagatgtagctgatgataatggggaacaaggaggatgggac
ttggaggacctggatcttcctccggaggttgatactccaaaagcatctgttagtacccgt
tcggcaatatttgttgctccagctcctggaatgcctgtcagccaaatctggacacagaag
tcatcccttgctgctgagcatgcagctgccggaaattttgatactgcaatgcggttgcta
agtcgacaacttggtattaaaaattttactcctctgaaacccatgtttctcgatcttcat
aatggtagtcacagttatctacgtgcatttgcatctgctcctgttatatctgtggccttg
gaaagggggtggactgagtcggctagccctaatgtgagaagcccacctgccctagtgttt
agtttctcccaatcagaggagaagctgaaggctggttacaaggctacaacagccggtaaa
ttctcagatgctctccgtattttcttagggatattacataccattcctctgatagttgtg
gagtccagaagagaagttgatgaagtgaaagagctgattgtcatagtgaaggagtatgtc
ttgggtcttaaaatggaaacgaagagaagagagttgaaggatgatccaaagcgtcaacag
gagcttgctgcttatttcactcatatcaatcttcaaatccctcatttgaggcttgccctt
caaaatgccatgactgtgtgttacaaggcaaagaatttcaacacagctgctacctttgcc
agacggctccttgagacgaaccctactaatgagcaacaggcaaagctttctcggcaagtt
atacaggctgcggagaagaacatgaatgatgcagttgaattggactatgatttcagaaat
ccatttgtggtttgtggggccacgtatgtaccaatttatcggggtcaaaaagacgtctca
tgtccctactgtagtgcacggtttgtgccaggcctggagggacaaatctgtaatgtatgt
gagctcgctgtgattggagcagatgcttctggtttgctttgttccccgtctcaggtaaga
tga
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