KEGG   Beta vulgaris (sugar beet): 104904291
Entry
104904291         CDS       T03548                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bvg04131]
    104904291
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bvg04147]
    104904291
Membrane trafficking [BR:bvg04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104904291
Exosome [BR:bvg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104904291
  Exosomal proteins of bladder cancer cells
   104904291
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Fis1_TPR_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD_LRWD1 Aa-Ago_N
Other DBs
NCBI-GeneID: 104904291
NCBI-ProteinID: XP_010690807
LinkDB
Position
9:37227420..37235359
AA seq 1220 aa
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLLR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREQDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGESMFYAKDRFLRFFEFSTQRDTQVIPIRRPG
TASLNQGPRTLSYSPTENAVLVCSDVDGGSYELYVVPKDVFGKGDVAQEAKRGIGGSAVF
IARNRFAVLDKSNNQVLIKNLKNEIVKKSVLPIATDAIFYAGTGNLLCRAEDKVVIFDLQ
QRLVIGELQTPFVKYVVWSNDLESVALLSKHAIVIASKKLVHQCTLHETIRVKSGSWDDN
GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGNTIFCLDRDGKNKAIVIDATEYI
FKLSLMRKRYDHVMNMIKSSQLVGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDYWYRLGVEALRQGNTAIVEYAYQRTKNFERLSFLYLMTGNVEKSNK
MLKIAEVKNDVMGQFHNALYLGDVEERVKILESAGHLPLAYITASVHGLHDVAERLATEL
GDDIPSLPEGKVPSLLIPPAPVMCAGDWPLLRVMKGIFQSDFDGGDRGGAEDEDEAEANW
GEDLDMIHINDDENVENGDTAEDLDDADVADDNGEQGGWDLEDLDLPPEVDTPKASVSTR
SAIFVAPAPGMPVSQIWTQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKPMFLDLH
NGSHSYLRAFASAPVISVALERGWTESASPNVRSPPALVFSFSQSEEKLKAGYKATTAGK
FSDALRIFLGILHTIPLIVVESRREVDEVKELIVIVKEYVLGLKMETKRRELKDDPKRQQ
ELAAYFTHINLQIPHLRLALQNAMTVCYKAKNFNTAATFARRLLETNPTNEQQAKLSRQV
IQAAEKNMNDAVELDYDFRNPFVVCGATYVPIYRGQKDVSCPYCSARFVPGLEGQICNVC
ELAVIGADASGLLCSPSQVR
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgttgacgaagtttgagacaaagagtaatagggtcaagggactcagttttcatacaaag
aggccatggatcttggcgagtcttcacagtggtgtgatccagttatgggattacagaatg
ggtacacttattgatcgatttgatgagcatgatggccctgttcgtggtgttcatttccat
aaatctcagccactgtttgtgtcaggaggtgacgattacaagattaaagtttggaattat
aaacttcaccggtgtctttttacactacttggacatcttgattacattcgtacagtgcag
tttcaccatgagagcccatggattgtgagtgccagtgatgaccagactattcgcatatgg
aattggcagtcacggacatgtatctctgtcttgacaggacataaccattatgttatgtgt
gcctcatttcatcctaaagaagaccttgttgtgtcggcctcccttgatcagactgttcgg
gtctgggatattggagcgctaaaaaagaaaagtgcgtctcctgcagatgacctattgcgg
ttgagtcagatgaatactgatctttttggtggtgttgatgccgtggtcaagtatgtcttg
gaaggtcatgataggggggttaattgggctgcatttcatcctacccttcccttgattgtt
tctggagctgatgatcgccaagtgaaattatggcgtatgaatgatacaaaagcttgggag
gtggacactttgaggggacacatgaacaatgtctcctgtgttatgttccatgccaaacaa
gatattatcgtttcaaattcggaagacaaaagtattcgtgtatgggatgtaacaaagagg
accggcattcaaacattccgtcgggagcaagatagattttggattcttgcagctcatcct
gagatgaatctcctagctgctggccatgacagtgggatgattgtcttcaaattggagaga
gagcgtcctgcattttctgtgagtggtgaaagcatgttctatgcgaaagaccgttttctg
cgttttttcgaattttcaactcagcgagatacccaagttatcccgattcgccggcctgga
accgcaagcttgaatcagggtcctaggactctttcctatagtcctacagagaatgcggtc
cttgtatgctctgatgttgatggtggatcttatgagctttacgttgtaccaaaggatgtg
tttggcaagggtgatgtggctcaagaggcaaaaagaggtattggaggatctgctgttttt
atcgctcgtaacaggtttgcagtgcttgataaaagcaacaaccaagtgctaatcaagaat
cttaaaaatgagatcgtgaaaaagagtgtcctccctattgccactgatgcaatattctat
gctggtactggtaatttgctctgtagggcagaagataaggttgttatttttgaccttcaa
caaaggcttgttattggtgaacttcaaaccccttttgtcaagtatgttgtctggtcaaat
gacttggagagtgttgctttgctgagcaaacatgctatagtgattgcaagtaaaaagctt
gtgcatcagtgcactcttcatgagacaattcgagttaagagtggatcctgggatgataat
ggagtcttcatctatacaactttaaaccacatcaagtattgccttcctaatggagatagt
ggcataattaaaacgcttgatgtgcctatatatatcaccaaagtatctggaaatacaatt
ttttgcctggatcgggacggaaagaacaaggccatagttattgatgcaacagagtatata
ttcaagctatctctgatgaggaagaggtatgaccatgttatgaacatgataaaaagctcc
caactcgtggggcaggcaatgatagcttatctgcagcagaaaggatttcctgaagttgct
ctgcattttgtaaaagatgaaaggactcgttttaatttagctctggagagtggaaatatt
caaattgccgttgcttcagcgaaggaaattgatgaaaaggattactggtatagactaggg
gtggaggctcttcgccagggtaacacagctattgttgaatatgcataccagaggaccaaa
aattttgagagattgtcgttcctctatcttatgacagggaatgtggagaagtcgaacaaa
atgttgaaaattgcagaggtaaagaatgatgtcatgggtcaatttcataatgccctttat
ttgggtgatgtggaggagcgtgtgaagattttggaaagtgctgggcatttgcccctggct
tacatcacagcttcagtccacgggctgcatgatgttgctgagaggctagctacggagttg
ggagatgatattccctccttgcctgaaggtaaggtgccctcccttttgatacctccagca
cctgtcatgtgtgctggcgattggcccctgttgagagtgatgaaggggatctttcagagt
gattttgatggtggtgacaggggtggtgctgaagatgaagacgaggctgaggccaattgg
ggtgaagatttggatatgattcatataaacgatgatgagaatgtagaaaatggagacact
gcagaagatttggatgatgcagatgtagctgatgataatggggaacaaggaggatgggac
ttggaggacctggatcttcctccggaggttgatactccaaaagcatctgttagtacccgt
tcggcaatatttgttgctccagctcctggaatgcctgtcagccaaatctggacacagaag
tcatcccttgctgctgagcatgcagctgccggaaattttgatactgcaatgcggttgcta
agtcgacaacttggtattaaaaattttactcctctgaaacccatgtttctcgatcttcat
aatggtagtcacagttatctacgtgcatttgcatctgctcctgttatatctgtggccttg
gaaagggggtggactgagtcggctagccctaatgtgagaagcccacctgccctagtgttt
agtttctcccaatcagaggagaagctgaaggctggttacaaggctacaacagccggtaaa
ttctcagatgctctccgtattttcttagggatattacataccattcctctgatagttgtg
gagtccagaagagaagttgatgaagtgaaagagctgattgtcatagtgaaggagtatgtc
ttgggtcttaaaatggaaacgaagagaagagagttgaaggatgatccaaagcgtcaacag
gagcttgctgcttatttcactcatatcaatcttcaaatccctcatttgaggcttgccctt
caaaatgccatgactgtgtgttacaaggcaaagaatttcaacacagctgctacctttgcc
agacggctccttgagacgaaccctactaatgagcaacaggcaaagctttctcggcaagtt
atacaggctgcggagaagaacatgaatgatgcagttgaattggactatgatttcagaaat
ccatttgtggtttgtggggccacgtatgtaccaatttatcggggtcaaaaagacgtctca
tgtccctactgtagtgcacggtttgtgccaggcctggagggacaaatctgtaatgtatgt
gagctcgctgtgattggagcagatgcttctggtttgctttgttccccgtctcaggtaaga
tga

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