Beta vulgaris (sugar beet): 104904306
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Entry
104904306 CDS
T03548
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104904306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104904306
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104904306
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_16
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104904306
NCBI-ProteinID:
XP_010690825
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Position
9:complement(37423532..37431524)
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AA seq
869 aa
AA seq
DB search
MKRGAAEVCTDSYAPNSKMMKYSNEGGGESGRIFDYSDPFTITDMLESINSGKYGSVTKD
VEALVARKMQIFNSLFTMYPDLECTSPGARYNANGDVMSKDIVNLENVDAKSITTTPAPV
LIIESDDEEDVDRKPFSHFQEIAFPRPLPTIDLLTESLLVSNHMGVNTPRGEEQNIDKVK
DKGSYVGVEDELSEEDHGLVAEDEDLSEMWNQMNFALESSKDVPVDESGDEPSVEEDEGC
DHSYVLKDDIGYVCRVCGVIQRAIETIFDYQYIKAARVRSYRPDSRSNRDNDDTDVNLDG
LKLSGHDLAVAEISAHPRHKKQMKPHQLEGFNFLLSNLITENPGGCILAHAPGSGKTFMI
ISFMQSFLAQYPDARPLVVLPKGILPTWKKEFQRWQVEDIPLLDFYSMKADNRTQQKVVL
KQWVEQRSILFLGYKQFSTIVTGDSSCKTTAYCQEVLLKRPTILILDEGHTPRNENTDVL
HSLAKVQTPRKVVLSGTLYQNHVKEVFTILNLVRPKFLKLDTPRCIKKRIMSRVQFHGFK
KQLKGGNVESNFFDLVEYTLQQDEDWKRKEAVIKDLREMTSKVLHYYRGDFLDDLPGLVD
FTVLLGLSPQQKIEVDKLKKREKTKFRKTSLGCAVYTHPRLKQFSDVNSGTEKLSLLNDA
KIDELVERIDMRDGVKAKFFLNMLGLCESSDEKLLVFSQYLLPLKFLERLAVCRKGWSIG
KEIFMICGDTSTEQRELHMDRFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPS
VSRQAIGRAFRPGQEKKVYAYRLIAADSPEEEDHLTCFKKEQIAKRWFEWNEYRGSQDFG
MEPVDLKDSGDPFLESQWLAEDVKALHRR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaggagctgcagaagtttgtacagatagttatgctccgaatagcaaaatgatg
aagtattcgaatgaaggaggtggagaaagtggtagaatctttgattattctgatccattc
acaattacagatatgttagaaagcattaattctggtaagtacggatctgttacaaaggat
gttgaagcacttgttgcacgaaaaatgcagattttcaattctctatttacaatgtatcct
gatcttgaatgcacatcaccgggtgcaagatacaatgcaaatggagatgtgatgagtaag
gatatagttaatttggagaatgttgatgctaaatctatcactacaactcctgctcctgtt
ttaataattgagtcggatgatgaggaagatgtggacagaaaacctttcagtcactttcaa
gagattgcctttcccaggcctctgcctactattgatctccttacagagagcttgctggtt
agcaatcacatgggcgtcaatactcccagaggagaggagcaaaatattgataaagtaaag
gacaaaggcagttacgttggtgtcgaagatgagttgagtgaggaagatcatggccttgtt
gctgaagatgaagacctgtctgagatgtggaatcagatgaattttgcattagaatcttcc
aaggatgttccagttgatgaatcaggtgatgaaccttcagtggaagaggatgagggctgt
gatcattcatatgtcctcaaagatgatataggctatgtatgccgcgtttgcggcgttatt
caaagggcaattgagactatatttgattaccagtacataaaggctgctcgagtgagaagt
tacaggcctgattcacgttctaacagagacaatgatgataccgacgtcaatttggatggg
cttaagctgtctgggcatgatttggctgtggctgaaatctctgctcatcccaggcataag
aagcaaatgaagcctcatcagctagagggatttaacttcttgttaagcaacttaattact
gaaaatcctggtggttgcatattggcacatgctcctggctctggaaagactttcatgatt
atcagtttcatgcagagttttctagcgcagtatccagatgctaggccgttggttgtgctg
ccaaagggtattcttcctacatggaaaaaggagtttcaaagatggcaagtggaggacatt
cctctgcttgatttctactccatgaaagcagacaataggacacagcaaaaggtagttctc
aaacagtgggtagagcagaggagcatactgtttttggggtataagcagttttctactatt
gttaccggtgacagctcatgcaagacaactgcctattgccaagaggtactgctgaagcgc
cctaccattcttatcttggatgaaggtcacactcccagaaatgagaatactgatgtgctg
cactcacttgccaaggttcagactcctagaaaggtagtgctatctggcacactatatcaa
aatcacgtcaaggaagttttcactatcttaaatttggtccgtccaaaatttttgaagctt
gacactcctcgttgcataaagaaacgtatcatgagtagagtgcagtttcatgggttcaag
aagcagttaaaaggggggaatgtggagagcaacttttttgaccttgttgaatacaccctt
cagcaggatgaggattggaaaagaaaggaggctgttattaaagatttgcgggagatgact
agcaaagtgctgcactactacaggggagacttcttggatgatctcccaggacttgtagac
ttcactgttcttcttggtctgagccctcaacagaaaattgaagttgacaagctgaaaaag
agggagaaaacaaaattcagaaaaacttccttgggctgtgcagtttacacccacccaagg
ctgaagcagttttcagatgttaattctggtactgaaaaactttcactgcttaatgatgcg
aaaatcgatgagcttgttgaaaggatagatatgagagatggcgtaaaggctaaatttttc
cttaacatgctgggtttgtgtgaaagctctgatgaaaagctacttgtgtttagccagtat
ttgttgcctctgaagtttcttgaacgattagctgtctgtaggaagggttggtccattggt
aaagagatcttcatgatatgtggtgatacatctactgagcagcgagaattacatatggac
aggttcaacaactcccctgatgcaagggtcttttttggatcaatcaaagcttgtggagaa
ggaatatctctagtaggtgcctctcggattataatcttggatgtgcacctgaacccatct
gtctctcgccaagcaatagggcgtgcatttcgacctggtcaggagaagaaagtttatgct
tatagattgattgctgctgactctcctgaagaggaagaccatctaacatgtttcaagaag
gaacaaattgcaaagaggtggtttgagtggaatgagtaccgtggaagtcaggattttggg
atggaaccagttgatctgaaggactctggtgatcctttcttagagagccagtggctagct
gaggatgtaaaggccttgcatcgaaggtaa
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