Beta vulgaris (sugar beet): 104904548
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Entry
104904548 CDS
T03548
Symbol
LOC104904548
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
bvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104904548 (LOC104904548)
03460 Fanconi anemia pathway
104904548 (LOC104904548)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvg03032
]
104904548 (LOC104904548)
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104904548 (LOC104904548)
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104904548 (LOC104904548)
DNA replication proteins [BR:
bvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104904548 (LOC104904548)
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104904548 (LOC104904548)
Bloom's syndrome complex (BTR)
104904548 (LOC104904548)
FA (Fanconi anemia) pathway
104904548 (LOC104904548)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
104904548
NCBI-ProteinID:
XP_010691128
LinkDB
All DBs
Position
9:50491237..50503664
Genome browser
AA seq
1238 aa
AA seq
DB search
MSGKGFIAGEECNKKHPKVNWAEHVKSHNNFATQNKFLTSNFLFSLPTQKAHSEDRMMGC
QVQSIARSQTEQAWKALSNLQLGCRSFVRPGKTVLPVKDVNAFQIAGRHTVPNNSHYSSI
KNSVNQQLHHKIGESNDKSGDPTRYYATSIPTYEASEAGKAIDDQNKRERTVLHNSRLPI
PEGSWHYNVKAISDSKGPDEAITDVVNDDDILENIDVDQIVMEHYQSSCTPQPTGSKPLQ
VTPVAAKHDILRHDGTLLPPELCCNCSHGTQLGLCPEGANHLQEMKDTLISISNELLDNL
ELTPERMETLRQDRLQLNKQIQLLETQVRNSAIDIERQNSQFSASTANVRGFYHETPQAT
FRSSNGNGTPQTTFGSMNGYNTPQASGYRAVPMRLDNQFNNFDESSGYNHCNASSVPFTS
MERFDFSSAPMVREPFTPMVVDVNYIEGSSDKKWSSRDFPWTKKLEVNNKKVFGNHSFRP
NQREVINATMSGHDVFVLMPTGGGKSLTYQLPALICPGVTLVVSPLVSLIQDQIMHLLQA
NIPAAYLNANMEWSEQQEILRELCSDTCRYKLIYVTPEKIAKSDVFLRHLEKLYSLESLS
RIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPTTPVLALTATATAVVKEDVVQALGLANC
VVFRQSFNRPNLSYSVIPKTKKCVEEIDSFIRENHFDECGIIYCLSRMDCEKVADQLKER
GHKVAFYHGNMEVAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEG
YHQECGRAGRDGLRASCMLFYSYSDYIRVKHMLSQGVIEQSASLSMHNRSNSSSSGRIIE
TNIENLSRMVSYCENEVDCRRLLQLAHFGENFDPSHCKKTCDNCSKIRSSIEKDVTHVAI
QLVELVRSTGQHFSSAHILEVFRGSLSQYVKKHKHNSLKLHGAGKGLAKGEASRVLRHLV
VENFLVEEVKKSDLYGSVSSTLKVNDSKCRVLFSGSEKIILRFPSTTKVSALKLTRAEAT
AAKSMSSLGKTSPPQSNTSKPESDYDVNLAAKLYSALRKLRMALMTEGGERLMAHHIFTN
ATLHHIGRRVPRTKEELLEINGIGNIKLNKYGDRMLEIIEATIKQHYKIDKNSSSSNESA
DSIKRRREAAAKVSNGISNDNEDDLTESTGRSKKRAVQAKNIAEVKPLDIDVFSECLDDV
DLDFDDSVYETLTNGSNPRGETNANGRKLPSWSGQSNM
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaagggttttattgctggtgaagaatgcaataagaagcatcctaaagttaat
tgggctgagcatgtaaaatcacataataattttgctactcaaaataagttcttaacctct
aattttcttttctcgctacctacacaaaaggcacattctgaagacaggatgatgggctgc
caagttcagagtattgccagatcacaaacggaacaggcttggaaggccctctcgaacctt
cagctcggttgcaggagctttgtcaggccagggaaaactgtactgccagtgaaggatgta
aatgcctttcagattgctggaagacatacggtgccaaataactcacattatagcagcata
aaaaattctgtaaatcagcaattgcatcataaaattggtgaaagcaatgataaaagcgga
gatccgacaaggtattatgctacctcaattccaacgtatgaggcttctgaagctggaaaa
gctattgatgaccaaaacaagagagagagaacagtgttgcacaactctcgtttaccaatt
cctgaaggttcatggcattataatgtcaaggccataagtgatagcaaagggccggacgag
gcaattaccgatgtcgtaaatgatgatgatatcctcgagaacattgatgttgaccaaata
gtcatggagcactaccaatcaagttgtactcctcagcctactggttccaagcctctacaa
gttactccagtggcagctaaacatgatattctgagacatgacggaaccttgctgcctcca
gaattgtgctgtaattgcagtcatggaactcagctaggactctgtccagaaggggcaaat
catctgcaagagatgaaagatacgttaatttccatatcaaatgaactgcttgacaatttg
gagttaactcctgagagaatggagacgcttcgccaggacaggttgcagctaaataagcaa
attcagcttttggagactcaagtccgcaattctgctattgatatagagaggcagaattct
caattttctgcatcaacagcaaatgtaaggggcttttatcatgaaacacctcaggcaacc
tttaggtcgtcgaatggaaatggtacacctcagacaacctttggatctatgaatggatat
aatacacctcaggcatctggctacagagcagttccaatgagattagataaccagttcaat
aactttgatgagtcaagtggctataatcattgtaatgcatcatcagttccgttcacttct
atggagagatttgatttttcatcagctcccatggtgagagagccttttacacccatggtt
gttgatgtaaattacattgaaggttcaagtgacaagaaatggagtagcagggacttccca
tggacgaagaagttggaggttaacaacaaaaaggtgtttggtaatcattcttttcgaccc
aatcaaagggaagtaatcaatgcaaccatgagcggtcatgatgtttttgttttgatgcct
actggaggaggaaaaagtttgacatatcaacttcctgctctaatttgtccaggagtaaca
ctagtagtatcaccgcttgtttctctcatccaagatcagattatgcatcttttgcaggca
aatataccagcagcttacttgaacgccaacatggaatggagtgaacagcaagagatactt
agagaactttgttcagatacttgcagatataagctcatatatgttacgccagaaaaaatt
gccaagagtgatgttttcctgcggcatttggagaagctatattcgcttgagtcactttcc
aggattgttattgatgaagcccattgtgtcagtcagtggggacatgatttcaggccagat
tatcagagtcttggtatcttgaaacagaagtttccaaccacgccagttcttgctttaact
gccactgcaacagctgttgtcaaggaagatgttgtgcaagcacttggtcttgccaattgt
gttgtttttcggcaaagttttaaccgtccaaatttgtcgtattcagttatccctaaaaca
aaaaagtgtgtggaggaaatcgacagcttcatcagagaaaatcactttgatgaatgtggt
attatttattgcctttccagaatggactgtgaaaaagttgctgatcagttaaaggagcgt
ggacataaagtagcattttaccatggcaatatggaagttgcccaacgtgcttttgttcag
aagcaatggagcaaagatgaaattaatataatatgtgcaactgttgcttttggaatgggt
atcaataaaccagatgttcggtttgtgattcatcactccattccaaaatctattgaaggc
tatcatcaggaatgtggtcgtgctggcagagacggactacgtgcatcttgcatgctgttc
tacagttacagtgattatattcgtgtcaagcacatgctcagccagggggtaattgagcaa
agcgcatctttatctatgcataatcgttcgaattcatcaagttctgggagaataattgaa
actaacatagagaacctttcacgcatggtgagctattgtgaaaatgaagttgactgtcga
cgtcttctacagcttgctcactttggagagaattttgacccttctcactgtaaaaaaaca
tgtgacaattgctctaagataagaagttctattgagaaggatgttacacatgttgcaata
caattggtggagcttgtaaggtcaacaggacagcatttctcatcagctcacatcttggaa
gtcttccggggctccttaagtcaatatgtcaagaagcacaagcataattctctgaaactt
catggagcaggaaaaggtttggcgaagggtgaagcttcaagagtgctccgtcaccttgtt
gtagagaactttcttgttgaggaggtcaaaaaaagtgatttatatggatctgtctcatca
actctaaaggtcaacgatagcaaatgtagagtccttttctctggcagtgaaaagatcatc
ttaagatttccttcaaccaccaaagtatcagcattgaaattaaccagggctgaggcaaca
gcggccaagtccatgtcctctttggggaaaacaagtcccccgcaaagtaacacttctaaa
cctgaatcagattatgacgtgaatctcgctgctaaattgtactctgctcttagaaagcta
agaatggccctcatgacagaaggtggagaaaggctcatggcacatcacatattcacgaat
gcgacattgcatcatatcggcaggagggtacctcgaaccaaagaagaactactagaaata
aatggcatcggcaatataaagctgaacaagtatggtgatcgtatgctggaaatcattgaa
gctacgatcaagcagcattataagatagataaaaacagcagcagcagtaatgagagcgca
gattcaataaaaaggagaagagaggctgctgccaaggtttcgaatggtatctctaacgac
aatgaggatgacctgacggaaagcactgggagatcaaagaaaagagctgtccaagccaag
aacattgctgaagtcaaacccttagacattgatgtatttagtgaatgcttggatgatgtt
gatcttgattttgatgactcagtttacgagactctgactaatgggtcgaatccaaggggt
gaaactaatgctaatggaagaaagctgccttcgtggtcaggacaaagcaacatgtaa
DBGET
integrated database retrieval system
