Beta vulgaris (sugar beet): 104904591
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Entry
104904591 CDS
T03548
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104904591
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bvg01002
]
104904591
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104904591
03036 Chromosome and associated proteins [BR:
bvg03036
]
104904591
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104904591
Peptidases and inhibitors [BR:
bvg01002
]
Metallo peptidases
Family M67
104904591
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104904591
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
104904591
BRISC complex
104904591
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
104904591
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
104904591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
104904591
NCBI-ProteinID:
XP_010691183
LinkDB
All DBs
Position
9:complement(40439665..40448431)
Genome browser
AA seq
411 aa
AA seq
DB search
MSLTSVKMSEEVWLTCVTHAFSTETEEIMGLLLGDIECSRNGNSTALIWGASPQTRSDRR
KDRVETNPEQLAAASALADRMSASTGRRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFNEDAFKVGKIQVIAFQSLDGKQSYMSRPVTLSPVHKNNIIDVESSLSSD
DASRLGSGKGEKPEQDTGDSKTAVVKGSDIIIEGKFHPDNAGNAFGDIDPMDMSDGIQEA
MHRSHLEMSGAEYIRKEIPLYVLPASSLFELDSPLASFTDLQRVLYEEEKAAYNQAISQN
IRDGKVHPLTFIHHTSTYQASMCKLMEYCLTPAIEALEDRLRENELRLGMLTEEAKILEA
EASRGSEGTMGSPLRVDGYRGSPVRAQSFGESKNIRSPAPASPSSRSRKGL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaacaagcgtaaaaatgtcggaagaggtgtggttaacctgcgtcacccacgct
ttttctaccgagacagaagagatcatgggtcttcttctcggagacattgagtgctcaaga
aatggaaattcgactgctttgatatggggtgcatcaccccagacgcggtcagataggaga
aaggacagagtggagaccaatcctgaacagttggctgcggcttcagctttggcagataga
atgagcgcttcaactggaagaagaacaagagtgattggatggtatcattctcatcctcat
ataactgtccttccatcccatgttgatgtgcgtactcaggcaatgtatcagcttctagat
tcaggatttatcgggctcatattttcatgttttaatgaagatgccttcaaggttggaaaa
attcaagtcattgccttccagtccttggatgggaaacagagctacatgtcaagacctgtc
actctatctcctgtacataaaaataacatcatagatgttgaatcatctttgagttctgat
gatgcatcgagattgggttctggaaagggtgaaaaacctgagcaagacacgggcgattca
aaaactgctgtagttaaggggagtgatataataatagagggaaagtttcaccccgacaat
gctggtaatgcttttggtgacattgatcctatggatatgtctgatggtatacaggaagca
atgcaccgctctcatttggagatgagtggtgcagaatatatccgtaaagaaatccctctc
tatgttcttcctgcatcgtcccttttcgagctcgattcacctttggcctcctttacggat
ttgcagcgtgtgctatatgaagaggagaaggctgcttataaccaagccatatcccagaat
atcagagatggcaaggtgcatccacttactttcattcatcatacatcaacatatcaggct
tcaatgtgcaagttgatggagtactgtctgactcctgctatagaggctcttgaagatcgt
ctacgagaaaatgaacttcggttagggatgttgactgaagaagcaaaaatcttggaggcc
gaggcctccagaggaagtgagggaactatgggatctcctcttcgagttgatgggtatcga
ggcagtcctgttcgtgctcaaagttttggggaatcgaaaaatataagaagtcctgctcct
gctagtccaagtagcaggagtaggaaaggactttga
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