Beta vulgaris (sugar beet): 104904990
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Entry
104904990 CDS
T03548
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104904990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104904990
Enzymes [BR:
bvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104904990
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
104904990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
104904990
NCBI-ProteinID:
XP_010691732
LinkDB
All DBs
Position
9:complement(45196949..45203355)
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AA seq
1106 aa
AA seq
DB search
MEISPATTSYDSQIRSSNSDEASSNDVPNEEMREEREFAGNFPATSSTSSVSVKNMYDDD
DDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFAFS
PVYAEDAPTRLPFREFVLGIGKKTCHVLKFFLRLGFVLSVWLLIIPFITFWIWRLAFVRS
FSEANRLFLSHMSFTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHIREAQGQDADRDD
EGDRNGARAVRRPLGQANRNLLADGNVDDGEAQGIAGAGQLIRRAENVAAQWERQAARLE
VHVDQIFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFTPFSLG
RVILHYVSWLFSSATNPVLSTVMPLTESALSLANITLKNALTAVTSPSSEKSENLIDHVA
DILRANSSELNVSPNNSSSSLTSDVLQGVTAGTSKLSDVTTLAVGYMFIFSLIVLYFGMI
ALIRYTKGEPLTMGRFQGIASAAENIPSLLRQFFSGMRHLMTMIKVAFLLVIELGVFPLM
CGWWLDICTIRMFGKSMAQRVEFFSVSPLASSLVHWVVGIFYMLQISIFVSLLRGVLRNG
VLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMTPSI
FPLDISVSDPFTEIPADILLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLL
PKPEDTVGQDNGNGEAGRQDRLHGVQLGGAQQDQAQLAMLRDAQDNDAHGSENSDVMEDY
DGEEQSDSERYGFVFRIVLLLVVAWMTLLVFNSALIVIPVSLGRAIFNSIPVLPISHGIK
CNDLYAFTIGSYIIWTVIAGVRYTIEQVKSGRAAVLFGQIWKWCGIFFKSFVLLSIWIFV
IPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESW
RAKFERVREDGFSRLQGLWVLREIVLPIILKLLTALCVPYVLARGVFPVLGYPLIVNSAV
YRFAWIGCLCLSVLFFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEASLQRSSEEKEI
SSVRQDDVIRQDDVGLRLRRGNQVDA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggagatttctccggcgacgacgtcttacgattctcagatccggagttcaaactccgat
gaagcgtcgtcgaatgatgttccgaatgaagagatgcgagaggagagagaattcgccggc
aattttccggcgacgtcttctacatcgtcggtttctgtgaaaaatatgtacgatgatgat
gacgatgaagaggatgtttgtaggatttgtcgaaatcctggagatgctgataatccgttg
aggtatccttgtgcttgtagcggaagtattaaatttgttcatcaggattgtctccttcag
tggcttaatcacagtaatgctcgacagtgcgaggtttgcaagcatccatttgcattctct
cctgtttatgccgaagatgccccaactagacttccttttcgggagtttgtgcttggcata
ggaaagaagacttgtcatgtcctgaagttctttctgcgtctgggttttgtgctatctgtt
tggctcttgattatcccgttcatcaccttttggatttggcggctggcttttgttcgtagt
ttttctgaagccaatcgtttattcctcagtcatatgtcatttaccgttattctcaccgat
tgtctgcatggctttcttctctccgctagcattgtgtttattttccttggtgctacatct
ttgagagattattttagacatatacgagaagctcaaggacaggatgctgatcgagatgat
gaaggggataggaatggggcccgagctgtgagaaggcctcttggacaagccaacagaaat
ttgcttgctgatggcaatgttgatgatggagaagctcaaggaattgctggggctggtcaa
ctgatcagacgagcagaaaatgttgctgctcaatgggagagacaggctgctcgacttgag
gttcatgttgatcagatttttgatggtctggatgatgccgatggtgctgaagatgttccc
tttgatgaacttgtgggcatgcagggtcctgttttccatctggttgagaatgcttttact
gttttagcaagcaacatgatctttcttggagttgttatctttactcctttttctctggga
cgtgtaattctacattacgtatcatggcttttctcttcggcgacaaatccagtgctttcc
acggtcatgccacttacagaatcagctctctccttagctaacatcaccctgaagaatgct
ttgacagctgttactagtccatcttctgaaaaatcagaaaatctcattgatcatgtagct
gatatattgagagcaaattcaagtgagctgaatgtttctcccaacaacagtagcagctcc
ctgacctccgatgtccttcaaggggtgactgctggaacgtccaagctttctgatgttacg
accctggctgttgggtacatgtttattttctctctcatcgttctgtactttggtatgatt
gcattaattaggtataccaaaggtgagcctttaacaatggggaggttccaaggtattgct
tcagcagcagagaatattccatctcttttacgccagttcttttctggcatgagacattta
atgacgatgattaaggttgctttccttctggttatcgaacttggcgtttttccactgatg
tgtggctggtggctggatatctgcacgatacggatgtttgggaaatcaatggctcaaaga
gttgaatttttttcagtctctcctttggcgagttccttggttcattgggttgtcgggata
ttctacatgctgcagatcagcatctttgtcagccttcttcgaggggtgttgcgtaatgga
gtcctgtatttccttcgagatccagctgatcctaattacaatccatttcgcgatcttatt
gatgatcctgttcacaaacatgcacgcagagttttgctttctgtagctgtctatggcagt
ttgattgtgatgcttgtttttctgcctgttaaactcgcaatgcggatgacgccctccata
tttccacttgatatctcagtatcagatccatttactgaaatacctgctgacatactgctg
tttcaaatctgcattccctttgccattgagcatttcaaattgagaacaacaattaagtct
cttcttcggtattggttcactgctgttggctgggcacttggcttgacagattttttactt
cctaaaccagaggacacagttggtcaggataatggcaatggtgaagctggcaggcaggac
agattacatggtgtacagttggggggtgcacagcaggatcaagctcagctagcaatgctt
cgtgatgctcaagacaatgatgctcatggctctgaaaattcagatgtgatggaagattat
gatggagaagaacaatctgattcagagcggtacgggtttgtatttcgtattgtgctgctc
ttggtggtggcctggatgaccttacttgtcttcaattctgcattaattgttatacctgta
tctcttggaagggctatcttcaattccatcccggttcttccgatatcacatggcataaag
tgcaatgacctgtatgctttcaccattggaagctacattatttggactgtcatcgctggt
gtcagatatacaattgagcaggtgaaatcgggaagggctgctgttctttttggtcaaatc
tggaagtggtgtggaatatttttcaagagttttgtacttctatcaatatggatatttgta
atccctgtcttgatagggcttctgtttgagcttttggtgattgtaccaatgcgagtacca
gttgatgaaagccctgttttcctcctgtaccaagactgggctttgggactgatatttctg
aagatatggacaagattggttatgttggaccacatgatgcccttggtagatgagagctgg
agagctaaatttgagagagtgagagaagatggtttctcaagattacagggtctttgggtg
ctgcgggagatagtgctacctatcatactgaaactgttaacagctctctgtgtaccttat
gttttagctcgaggagtatttcccgttcttggttaccccttgattgtcaactcggctgtc
taccggtttgcttggataggttgcctgtgcttaagcgtgttatttttctgtgcaaagcgg
ttccatgtctggttcacaaacttgcacaattccattcgtgatgaccgttacctgataggt
cgcaggcttcataattttggggaagcctcactacagaggtcttcggaagaaaaagaaatt
tcaagcgtgcgacaggatgatgtaattagacaagatgacgtcggtttgagattaagacga
ggcaaccaagttgatgcctaa
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