Beta vulgaris (sugar beet): 104905005
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Entry
104905005 CDS
T03548
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104905005
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104905005
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
104905005
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
104905005
NCBI-ProteinID:
XP_010691756
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Position
2:complement(2556421..2564108)
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AA seq
593 aa
AA seq
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MAKEEATSNPNKALTNTRFSNLKPELSEPVLEALNHGGFEHCTPVQAATIPLLCSYKDVA
VDAATGSGKTLAFIVPLVEILRRSTSSPKPHQVLGIIISPTRELSSQIYNVALPFISTLS
NVKPMLLVGGVEVRADVKKMEEDGANVLIGTPGRLFDIMERVDVMEFRDLEVLILDEADR
LLDMGFQKQINSIISRLPKIRRTGLFSATQTEAVEELAKAGLRNPVRVAVRAETKSSDND
PGMASNSITPSGLHIEYLACEADKKSSELVDLLVKYKSKKIIIYFMTCACVDYWGVVLPQ
LAVLKGHSLISLHGKMKQNAREKALASFTGLSSGVLLCTDVAARGLDIPGVDCILQYDPP
QDPNVFIHRVGRTARMGKQGSAVVFLLPKEESYVEFLRIRRVPLQERMCSDNAPDVIPEI
RSAAKKDRDVMEKGLKAFVSFIRAYKEHHCSYIFRWKGLEVGKLAMGFGLLQLPSMSDVK
LHTLSTEGFIPAEDVKFQEIKFKDKSREKQRKRKLLEKRSEEKQNPKPQKHKPAPDHKTA
AMKKKTAKQRRAVQDKEDDDELTREYRLLKKLKKGAIGEDDYARLMGAEDLLE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaagaagctacgagcaacccaaacaaggcactaacaaatacccgattctcc
aaccttaaaccggagctatcagaaccagttcttgaagctttaaaccatggcggttttgag
cactgtacgccggttcaagccgccaccatccctttgttatgcagctataaagatgtcgca
gttgatgcggccactggttcaggaaaaaccctagctttcatcgtccctcttgtcgaaatt
ctccgacgctccacctcctctcctaaaccacaccaagtgctggggataattatttcacca
actagagagttgtcatcacaaatatataatgttgcactgccttttatctcaacgctttca
aatgtcaagccaatgctattagtcggaggagtggaagtaagagcagatgtgaagaagatg
gaggaagatggggcaaatgttttgattgggacaccaggaaggctgtttgacatcatggaa
cgtgtagatgtcatggaatttcgtgacctcgaggttttgattctggatgaggctgacagg
cttttggatatgggatttcagaagcagattaattccataatatcgcgcttaccaaagatt
cgtagaactggtctgttttcagctactcagactgaagcagttgaggagctggctaaagct
ggattaaggaatcctgtgagggttgcagtccgagcagaaacaaaatcatcagataatgac
cccggaatggccagcaattcaataacaccttccggcctgcatattgagtatctggcgtgc
gaggcagacaagaaatcatcagagcttgttgaccttcttgtcaaatacaaatccaaaaag
attattatctactttatgacttgtgcttgtgttgattactggggagttgttcttccacag
ctcgctgttttgaagggccattcactaatttctctgcatgggaaaatgaaacaaaatgct
agagagaaagctttagcttcatttacaggtctttcaagtggggttcttctttgtactgat
gtcgctgctcgtggattggacataccaggcgttgactgcattttgcagtatgacccacca
caagatccaaatgtattcattcatagagttggtcggactgctcggatgggaaaacaggga
agtgcagttgtctttttgttgcccaaggaggaatcatatgttgaatttctgcggataagg
agggttcctctacaggagaggatgtgctctgataatgctcctgatgtcattcccgagata
aggtctgctgcaaaaaaggaccgtgatgttatggagaaaggacttaaagcatttgtctca
ttcatccgtgcatataaggagcatcattgctcttacatcttcaggtggaaaggactagaa
gtcgggaagttggcaatggggtttgggttattgcagctaccttcaatgtcagatgtgaag
ctccacaccctatcaactgaaggttttattccagctgaggatgtgaagtttcaggagatc
aaattcaaggacaaatctcgtgagaaacaaaggaaaaggaagttactggagaaacgatca
gaagaaaagcaaaatccaaaaccacaaaaacacaaacccgctccagatcataagactgct
gcaatgaagaagaaaacagcaaaacaaagacgtgctgttcaggataaggaagatgatgat
gagttaactcgagaataccgccttttgaaaaagttgaaaaagggagctattggtgaggat
gattatgcgaggttgatgggagctgaagatttgcttgaatga
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