Beta vulgaris (sugar beet): 104905138
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Entry
104905138 CDS
T03548
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104905138
03009 Ribosome biogenesis [BR:
bvg03009
]
104905138
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104905138
Spliceosome [BR:
bvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104905138
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
104905138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HK_sensor
AAA_22
Motif
Other DBs
NCBI-GeneID:
104905138
NCBI-ProteinID:
XP_010691891
LinkDB
All DBs
Position
1:complement(1375610..1386944)
Genome browser
AA seq
724 aa
AA seq
DB search
MGSGFVFEAPSDEESEHELNSDDEQQTKSAWDFAAYSEAVAEEHARRHTTSVDQKIQKLR
LQKNSSHSNPTYSDSGSDSDSEHNKQEDYKPEEGDDDDNDAVDVNNKKPFFAAAEGVSYQ
AISFLELNLSRPLLRACEALGYSKPTPIQAACIPLAMNGRDICASAITGSGKTAAFALPT
LERLLFRPKRVPAIRVLILTPTRELAVQVHSMTEKLAQFTDIRSCLIVGGLSPKVQEAAL
RSLPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIQELVRMCSKRR
QTLLFSATMTEQVNELVKLSLNKPIRLSADPSAQRPATLTEEVVRIRRTREAHQEAVLLA
LCSKTFTSRVIIFSGTKLAAHRLKILFGLAGLKAAEIHGHLTQAQRLDSLELFRKQEVDF
LIATDVAARGLDIAGIQTVINFACPRDLTTYVHRVGRTARAGREGYAVTFVTDNDRSLLR
AIAKKAGSMLKSRIVAEQSINKWVQKIEQMEDQVIAIVREEREEMALRKAEMEASKAENL
IVHRDEIFSRPKKTWFITEKEKKLMAKEMKASLGKEKNSGNDVVSAQQAEDLKMKEKRKR
EREKNLPRKKRRKLEAAREMLEEENESGDSEEENKKGRKDKSGIPLVDVAYRRAKAIKAG
NKAQEAGKKIKKIGRKATQPQSRTEEMQELFQTDMSERRLKKTVQRAGQKAKSSFKSKSR
YKRK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggttccggcttcgtattcgaggctccaagcgacgaagaatccgaacacgaactcaac
tccgacgacgaacaacaaaccaaatcagcttgggacttcgccgcttactccgaagccgtc
gccgaagaacacgcccgccgccacaccacctctgtcgaccaaaaaatccaaaaacttcgc
ctgcagaaaaactcctctcattctaaccctacttattctgactctggctccgattccgat
tccgagcacaacaaacaagaggattacaagccagaggagggagatgatgatgataatgat
gctgttgatgttaataataagaagcctttctttgcagcagctgaaggtgtttcctatcaa
gctatatcgtttctcgaactcaatctttcgaggccgttgcttcgagcttgtgaagcgttg
gggtactctaagcctactccaatccaggcagcttgcataccattagcgatgaacggacgt
gatatatgtgccagtgcaattaccggttccgggaagaccgcagctttcgccttgccaact
ctggagaggttgttattccggccaaagcgtgtaccagcaattagggttcttatacttact
ccgacaagggagctagctgtccaggtccacagtatgacagaaaaacttgctcagtttaca
gatataagaagctgtctgattgttggtggactatcacctaaggtgcaagaggctgcatta
aggtcgttgccagatgtggttgtggccaccccaggacgcatgattgatcatttacggaat
tcaatgtctgtagatttggacgatcttgctgttttgattcttgatgaggctgatcgacta
ttggagcttggttttaatgctgagattcaagaacttgttcgcatgtgctccaagcggagg
cagacactgctgttttctgccacaatgactgaacaggtgaacgagcttgtcaaactatct
ctaaataaacccatccgtctgtcagctgatccttctgctcagcggccagcaactttgact
gaggaggttgtgagaataaggagaacacgtgaagcccatcaagaggctgtgcttcttgca
ttatgctcaaaaacattcacatccagagttatcatttttagtggaacaaagctggctgct
cacaggttgaagatcttgtttggattagcgggccttaaagcagcagagattcatggccat
cttacacaagctcagcgtcttgattctcttgaactgtttagaaaacaggaagtagacttc
ttgattgcgacagatgttgctgctcgagggcttgacatagctggaattcagacagtcatt
aacttcgcatgtcctcgagatcttacaacatatgtgcatcgagtaggtcgtacagcaaga
gctggtagggaaggatatgctgtcacatttgtcacggataatgaccgttctctactaagg
gccattgcaaaaaaggctggttctatgttgaagagcagaattgttgctgaacaatcgata
aataagtgggtgcagaaaattgaacagatggaagatcaggttattgctattgttcgtgaa
gagagagaagaaatggctctgagaaaagccgagatggaagcatcaaaggctgaaaatctg
attgttcacagggatgaaattttctcccggcctaaaaagacatggtttataacggaaaag
gagaaaaaattgatggcaaaggagatgaaggcatccttgggaaaggaaaaaaattctggt
aatgatgttgtcagtgcccagcaagcagaagacctgaaaatgaaggaaaaaaggaaacga
gagcgtgagaaaaatctgcctaggaagaaacgcagaaagctggaagctgctagggagatg
ttggaagaggaaaacgagtctggtgattcagaagaggagaataaaaagggtaggaaagat
aaaagtggaataccacttgttgatgtggcctaccgcagagcaaaagctatcaaggctggg
aataaggctcaagaagctggtaaaaaaattaaaaagatagggaggaaagcaacacaacct
cagtcaagaacagaagagatgcaggagctattccagactgatatgagtgagagacggttg
aaaaagactgttcagcgagctggacaaaaggcaaaaagttcatttaagagcaaatcaagg
tataagcggaagtag
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