Beta vulgaris (sugar beet): 104905321
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Entry
104905321 CDS
T03548
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104905321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104905321
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104905321
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Miga
AAA_23
ACBP4_C
CUX1_N
DUF489
Motif
Other DBs
NCBI-GeneID:
104905321
NCBI-ProteinID:
XP_010692120
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Position
1:2020957..2031545
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AA seq
638 aa
AA seq
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MAGFTGFSFSNTSSASSSPSPFSFSLSSSSSASSAPSFGFGATSSASPSPSLSFGAASSA
SSAPSFGFGVASSTSSAPSFGFGASPISSAPSFSLSSAATSSSSTPNLFGSSSTAPSLFG
ATTTTAAATTTAPSPLFGSSSSSSSSAAFSFLKPSTPTTTTTTTTTTTPAFSFTPPASAS
PAATSSLFNFNNVTSSATAPATAAASPSKPLFGAAATPTVTPAAASASKPLFGAAATPAA
ASASASKPLFGAAATPTTTASAAAASLFSTPTTSTTPSSLPVSSAPSPAATAAAAAPAPF
TGFSLNSSTVATPAASSSPAAGAFSGFGVSTGSTSSGTTAAFPSFTLPTTKTTTPAQSQQ
TTPTTATTAATTGTVATTTTAAATGLLASTSASASIPSSTTTAAQTSSSLAVASSSGTTP
AVSTPVTSAPTPKMPSEITGKTVEEIIKDWNSELQDRTKKFQKQANAIADWDKRILQNRD
VLLRLETEVAKVVETQSNLERQLELIETHQQEVDKALESIEEEAERIYKDERVSLLDDEA
ASTRDAMYEQAESFEKELEHMTEQIKSIIQSLNASQGGELDTTEGMGPLDVVVRILNNQL
SSLMWIDEKAEEFSVRIQNLASQGSAADRELVAPRLWS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcgggattcactggattctctttctccaacacatcttccgcatcatcttctccttcc
cctttctctttctctctctcctcctcttcttccgcttcatcggctccttccttcggcttc
ggcgccacctcttcagcttcaccttcaccatctctctcctttggcgccgcatcttcagct
tcatcggctccgtcatttggcttcggcgttgcctcttcaacctcatcggctccgtcattc
ggcttcggcgcatcaccaatatcatcggctccttctttttctctctcctccgctgctact
tcttcttcttcaactccgaatttattcggatcttcttctactgctccttccttattcgga
gcaactactactactgctgccgctactactactgctccgtcaccattattcggatcatct
tcatcttcttcgtcttccgctgcattctcttttcttaaaccctcaactccaacaacaact
actacaacaacaacaacaacaacaccagcgttttccttcactccacctgcttctgcatca
cctgctgctacgtcatctttattcaatttcaacaatgtcacctcctctgctactgcaccc
gctactgctgctgcttcaccttcaaagccgttattcggcgcggctgctactcctactgtt
actcctgctgctgcttcagcttcaaagccgttatttggtgcggctgctactcctgctgct
gcttcagcttcagcttcaaagccgttatttggtgcggctgctactcccactactactgct
tctgctgctgctgcgtcgttgttctcaactcctaccacctcaacaaccccgtcttctctg
cctgtttcttctgccccttcccctgctgctactgccgctgctgctgcaccagcaccgttt
actgggttttctctgaattcgtcaactgttgcaactccagcagcttcgtcttcaccggca
gccggtgcgttttctggatttggggtctctactgggtcgacttcttctggaactactgct
gcatttccgagttttactcttcctactaccaagactactacccctgctcagtctcagcag
actactcctaccactgccactactgctgctactactgggactgttgccactactactact
gccgctgctactggtcttctggcttcaacttctgcctcagcgtccatccccagctctaca
acaactgcagcgcaaacatcttcatctcttgctgtagcctcaagtagtggaactactcct
gctgtgagcactccagtaacatctgctcccactcccaagatgccctctgaaataactgga
aaaactgttgaggagatcatcaaggactggaactctgaattgcaagatcgtacgaaaaag
ttccagaagcaggctaatgcaattgctgattgggacaagagaatattgcaaaatcgagat
gtccttctacgacttgagacagaagtggcaaaagtggttgagacccaatccaacctggaa
agacaactggagttaatagagactcatcaacaagaggttgataaagctctagaaagtatt
gaagaagaagctgagcgtatctacaaggatgaacgtgtatcacttctcgatgatgaagct
gcatccactcgagatgcaatgtacgagcaggcagaatcttttgaaaaggaactagaacat
atgaccgagcagattaaatcgatcatccagtccctgaatgctagtcagggtggagaactt
gatacaacagaggggatgggcccattagatgtggtggtgcggatcttgaataatcaattg
agttctctgatgtggattgatgaaaaggcggaagagttttcagttcgcatccagaatctt
gcaagtcaaggttcagctgctgatcgtgaactagtggccccaagattgtggagctga
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