Beta vulgaris (sugar beet): 104905344
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Entry
104905344 CDS
T03548
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104905344
Membrane trafficking [BR:
bvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104905344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
104905344
NCBI-ProteinID:
XP_010692158
LinkDB
All DBs
Position
1:2420187..2432484
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AA seq
1373 aa
AA seq
DB search
MVLPPLPMEDQTDEDFFDNLVDGELDGGGFEPSLLNNAGSNDEQSFANLSIDEVSTELDG
VDNVDRVEGDHSEKGGISDVVSCNVDDDKVEEIGVVGGAGGGAGVSGLGEAVDGECGDHV
VEEKNESDLKICGNGTISSVGSTEVQGGTEVQGGAFNSGIQEAPDEDFFNQIGDSSADPF
GEVADSFMGASGTLDGVSSNQATCSSSYNFGKDGEDIQHASSMEYSSEMQDQSSVQYWEN
LYPGWKYDPNTGQWYQVDGTGAIVNNIDESNGIVQSTGDGADANATSNLYHLQHTAQSVS
GSMTEESSAGSLAYWNQATYGNTEYPANMVFDPQYPGWYYDTIALEWRSLDSYNSSIHQS
SSFNQNQQSVYGSASAVNYYPEQNLIYGQGGQVNNYSAQLDQPVNWRDPGRVASNMAQHG
TNKAFSSPENTQYGSGPILSGAVSYPSEHGTGAASYDKSFSYEQPRHGFDSSNGCNRFQD
FGAGDTGFQNFASAEIPLQHNNQHNKFDQQFSAAGFNGPKIHNFTPEPHQNSREFYSLGG
GRSSDGRPSHALVSFGFGGKLIVMKDHSSLLTQPAYASQDSAGGVISIHNVMEVAMLKND
SSDVGFGDCEYIRTLCQQSFSGPLVSGNVGSKELNKWIDDSIANCDSQDADYREGEALKM
LLSLLKIACQYYGKLRSAFGADPGAKEHDSPESALAKLFSSAKGSATQFNAASHCLQNMP
SEGQIQATAEEVQTLLGTGRRMEALQCAQKGHLWGPAIVIASLLGEQFYGETVKQMALHQ
LAAGSPLRTLCLLIAGQPAEVFSNSISSNSQNGENDSQSSWVGPGFMLDEWEENLAIISA
NRTKGDELVITHLGDCLWRERGEVMAAHICYLVSEANIESYSESSRLCLAGSDHLKYPRT
YASPQAIQRTELYEYAKLLGNSQFVLLPFQPYKLIYACMLAEVGKLSDSLKYCQAVSKSL
KTGRSPEVDAWRHMVSSLEERIKIHQQGGYATNFGRAKLVGKLLNFFDNTAHRVVGGLPP
PTPSTSHNDGQHSEHDHQSRGPRVSTSQSTMAMSSLMRSASAEDSNHKSMHNRSMSEPDF
GRTPRKDVSPKSSSSSPRDNSSLSGSSSRFGRIGSQIFQKTVGLVLRSRPDCQAKLGEKN
KFYYDENLKRWVEEGIEPQAQQMTLAPPPTTTAFMNGTLDHNKEDESVNAMIHANGEPQY
KHTNFNGKGAELPPIPSGSNHFSARGRMGVRARYVDTFNKGGGTPANSFQSPSPSVPTMR
AASNTKFFVPTPVTGGLETQSTQNTQQTVGVDQDTMSNGHHSFSPPQMLTPLSTIHRHPS
MDKGMGSMVIGNGPLPPNSRRTLSWGGSLDISNHSSMSEPRPPGEAPGFPVST
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggtgctacctccattgccaatggaggatcagacggatgaggatttttttgataattta
gtggatggtgagcttgatggtggtggatttgaacctagtttgttgaataatgctgggagt
aatgatgagcaatcatttgcgaatttgagtatcgatgaagttagcaccgagttagatggt
gtagataatgtagatagagttgaaggggatcatagtgaaaagggtggcattagtgatgtt
gtttcgtgtaatgtcgatgatgataaggtagaagagattggtgttgtgggtggtgctggt
ggtggtgctggtgtttcggggcttggggaagctgtggatggggagtgtggtgatcatgta
gtggaggagaaaaatgaatctgatttaaagatttgtggcaatggtacaatttctagtgta
ggtagtacagaagtgcaggggggtacagaagtgcaggggggtgcatttaatagtggtata
caagaggctccagatgaggatttctttaatcaaataggagatagttcagctgatcctttc
ggtgaagtagctgatagttttatgggtgcatcaggcactttggatggtgtttcatctaat
caagctacctgttcaagttcatataattttgggaaagatggagaagatattcagcatgct
tcatctatggaatatagtagtgagatgcaagaccaaagtagtgttcaatactgggagaac
ctatatccaggttggaaatatgacccaaatactgggcagtggtatcaggtggacggtact
ggtgcgattgtaaataacattgacgaaagtaatggcatagttcagtcaacaggcgatgga
gctgatgccaatgcgacatccaatctttatcatctccagcacacagctcaatccgtgagt
ggaagtatgaccgaggaaagttcagcaggttccttagcttattggaatcaggccacgtac
gggaacactgagtatcctgcaaacatggtgtttgatccacagtatcctggttggtactat
gacacaattgcactagaatggagatcattagactcctataattcatcgatccaccagtca
tctagcttcaaccaaaaccaacaatcagtctatgggagtgctagtgctgttaattactac
cctgaacaaaatttgatctatggtcaaggtggacaagttaataattattctgcccaatta
gaccagccggtgaattggagagatcctggcagagttgcttcaaatatggcacaacatggt
acgaacaaggcttttagttctcctgaaaatacacagtatggtagtggacctatattgagt
ggtgctgttagttacccttcggaacatggaaccggtgctgcatcatatgataaatcgttc
tcatatgaacaaccaagacatggttttgatagcagtaacggatgcaacagatttcaagac
tttggtgctggtgacactggctttcaaaactttgcttctgctgaaattcctctgcagcat
aacaatcagcataacaaatttgaccagcagttctctgctgctggctttaatggtccaaaa
attcacaattttactccggaacctcatcaaaatagcagagaattctattcattgggtgga
gggagatcatcagatggacgaccttcacatgctctcgtctcttttggatttggtggaaag
ctcatagtaatgaaggatcatagtagtttactcactcaacctgcatatgcaagccaggat
tcagcaggaggtgtgatcagtattcataatgtgatggaagttgccatgctgaagaatgat
agttcagatgtaggatttggtgattgtgaatatattcgtactctatgtcagcaatcattt
tcaggcccgctggtttcaggcaatgtgggaagcaaagagttgaacaaatggattgatgac
agcattgcgaattgtgacagtcaagatgcagactacagggagggcgaagccttaaaaatg
cttctctctctgttgaaaatagcatgccaatattatggaaagttacgatctgcttttggg
gcagatcctggtgcaaaggaacatgacagcccagagtcagcattggcaaagctcttttca
tctgcaaaagggagtgctacacaattcaatgccgcctcccattgcttgcagaacatgccg
tcggagggacaaatacaggcaacggctgaagaggttcaaacgcttcttggtactggtaga
aggatggaggctcttcaatgtgcacaaaagggtcatttatggggaccagctattgttatt
gccagtttgcttggtgaacagttttatggtgaaactgtgaagcaaatggctcttcatcag
ctggctgccggatctcctctgaggactttgtgtcttttaattgctggacagcctgctgaa
gtattttccaattccatctcaagtaactcacaaaatggagaaaatgattcacagtcttct
tgggttgggcctggttttatgttagatgaatgggaagagaatctggctataataagtgct
aacaggacgaaaggtgatgagcttgtaattactcaccttggagattgcctctggagggag
aggggtgaggttatggcagctcatatctgttacttggtttctgaagctaacattgagtcg
tattcagagagctcaagactttgtcttgccggttcagatcatctgaaatatccaagaact
tatgccagtcctcaggcgattcagagaacagaattatatgaatatgcaaagctgcttgga
aattcccaatttgtattgctgccattccagccatacaagcttatatatgcttgcatgttg
gccgaagttggcaagctatcagattctctgaaatactgtcaagcagtttcgaagtctttg
aaaactggtagatcaccagaagttgatgcatggcggcatatggtatcttctcttgaagag
cgcataaaaatccatcagcagggtggatatgcgaccaattttggtcgagcaaaactggtg
ggtaaattgctcaacttctttgataatactgctcatcgcgttgttggcggcttgccgcca
cctacaccttcaacatcacacaatgatggccaacacagtgagcatgatcatcagtcaagg
gggccacgggtgtctactagtcagtccactatggccatgtcgtcattaatgagatctgca
tctgctgaagacagcaatcacaaatcaatgcacaatcgaagcatgtcagagcctgacttc
ggtagaacgcccagaaaggatgtatcaccaaaatcaagttcatcgagtccacgtgataat
tcatcgctctcaggtagttcctcacgttttggtcgaattggctcacaaatcttccaaaag
actgttggcttggtgctaagatctcgcccagattgtcaggccaagctgggagagaagaac
aagttttattatgatgaaaatctaaagcgttgggttgaagaaggtattgagcctcaagct
cagcaaatgaccttggctccacctccaacaactacagctttcatgaatggaactctagat
cataacaaagaagatgaatctgttaatgctatgattcatgcaaatggggaacctcagtac
aaacacacaaattttaatggaaagggtgctgaattaccacccattccatctggttcaaac
catttttcagctcgtggccgaatgggtgttcgtgcgaggtatgtggatacattcaacaag
ggtggaggaactccagcaaactcattccaatcaccatcgccttcagtcccaactatgaga
gctgccagtaataccaagttttttgtcccaaccccagttactggaggattagaaactcag
agtacccaaaacacacaacaaactgttggtgtggatcaagatactatgtctaatggccac
cattcattttcacctcctcaaatgcttacaccactctctacaatccaccgacatccaagc
atggacaaagggatgggaagtatggtaattggcaatggcccattacctccaaattcaagg
cgaacactatcgtggggcggaagtcttgatatttcaaatcactctagcatgagtgaacca
agacctcccggggaggcaccaggttttcccgtatctacttaa
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