Beta vulgaris (sugar beet): 104905498
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Entry
104905498 CDS
T03548
Name
(RefSeq) serine/arginine-rich splicing factor RS41
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104905498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104905498
Spliceosome [BR:
bvg03041
]
Common components
Common spliceosomal components
SR proteins
104905498
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104905498
NCBI-ProteinID:
XP_010692367
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All DBs
Position
1:4309141..4314869
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AA seq
333 aa
AA seq
DB search
MRAIFCGNLEYDARQSEVERLFKKYGRVERVDMKSGFAFVYMEDEKDADDAIRRLDRAEF
GRKGRRLRVEWTKQERDNRRSGGGARKPAANDKPSKTLFVINFDPIYTKSKDLERHFDAH
GKIANIRIRRNFAFIQYETLEDATRALEATNMSKLMDRVITVEYAIRDDDRSNGHSPERR
GRDFSPERGSYRRRSPSPYRRERGSPDYGYRRERGSPDYGRGGKHEARGSPEYGRDESPA
NGRYHSRSKPEGRGTPDYGRDESPANGRYHSRSKPEARGTPDYGRDESPAKERHHSRSKP
EARGTPDYARDEGPANGGRYNSRSPPPRERSRS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagggctatcttctgtggtaatttggaatatgatgcgcggcaatctgaggtcgagcgg
ctttttaaaaaatatggaagggtggaaagggttgatatgaagtctgggtttgcatttgtt
tatatggaagatgagaaagacgctgatgacgccatcagaagacttgaccgagctgagttt
ggcaggaaagggcgccgacttcgggttgagtggactaagcaagaacgtgacaatcgaagg
tctggtggtggtgcaagaaaacctgcagctaatgacaagccttctaaaaccctgtttgtc
atcaattttgatcctatctataccaaatccaaggacttggaaaggcactttgatgcacat
ggcaaaatagcaaacataaggatcaggagaaattttgcatttattcagtatgaaaccctg
gaggatgctactagggcactggaagctacgaacatgagcaagcttatggacagagttata
actgtggaatatgcgattcgagacgatgatcggagtaatggtcacagtcctgaaagaagg
ggtagggacttttctcctgagagaggaagctaccgtaggagatctcctagtccataccgc
agggaaaggggtagtccagactatggatatcgcagggagagaggcagccctgattatggc
cgtggcggcaaacatgaagctagaggtagtcctgagtatggtagagatgaaagccctgct
aatggaagataccacagtcgctctaaacctgaaggtcgaggaactcctgattatggtaga
gatgaaagccctgctaatggaagataccacagtcgctctaaacctgaagctcgaggaact
cctgattatggtagagatgaaagccctgctaaagaaaggcaccatagtcgctctaaacct
gaagctcgaggaactcctgattacgctagagatgaaggccctgcgaatggaggaagatac
aatagtcggtctcctccaccacgagagagatcaagatcctaa
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