Beta vulgaris (sugar beet): 104905682
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Entry
104905682 CDS
T03548
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104905682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104905682
Spliceosome [BR:
bvg03041
]
Complex A
U1 snRNP components
U1 related factors
104905682
Complex B
104905682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104905682
NCBI-ProteinID:
XP_010692586
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Position
1
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AA seq
1019 aa
AA seq
DB search
MGTAQNFGPPPVPAQFRPAVPGQQGQPYLPGSSPQFPSAGQNMPGQNMPSGPNQPMHHNQ
PMQFSQPMQQLPPRPGMPGVPFSSQGMGMSYGQQNRPMTLGAQQNQHSAPPFGNHTSGVG
GMGVPFSSSYTFQPVSHLPTPAAPVAGHPWLSSGGQSSAPFVPVPPTAEQSPVSSTIGLA
VNLPDTSQQSSSDWQEHTTPDGRRYYYNKKTKQSSWEKPSELMTPLERADASTVWKEFTT
PEGKKYYYNKATKESKWTIPEELKLARERAEKAASQGAQLETGVNSQSKPAGSLTPEEAR
TAAAVLASSNVSSSATLSVPPAVNPSPLVNAASAEIPVGHSAAPTSMAVTNTPAVTAPLS
AFTTGDPGLPASSNAPLITVNAADKLQSQETLTPMDGAPVQDHEEAHKGMLAAAKGDLIE
KPADDEPLVFASKQEAKAAFKSLLESANVQSDWTWDQAMRVIVNDKRYGALKTLGERKQA
FNEYLGQRKKQEAEERRMRQKKAKEEFMKMLEESEVLTSSIKWSKAITMFEDDERFKAVE
KPKDRQELFENYLVELQKKEKEKAEEEYRRNREEYWKFLESCDFIEANSLWRKVQDRLED
DERCSRLEKIDRLEIFQDYIRYLEKEEEEQKKLQKEQLRRVERKNRDEFRKMLEVDTAAG
ALTAKTSWREYCGKVKDSPAYLAVARNTSGSTPKDLFEDVVDELENQYHDDKSRIKDAMK
LCKIVMTSTWTFEEFKASISLELGSPLIADINLKLVFEEQLERVKEKEEKEAKKRQRLLD
DFTDLLRSLKEITVSSLWDDSKQLFEESEEYREIDNEILAKEAFEDYVVYLQEKAKEKER
KREEEKAKKEKEREEKEKRKEKDRKEKDKDRDREKRKERSKKEETDDEAMDATDSHNSYK
DESRKEKEKDRDRKHRKRHHDTTDDVTSDRDDDRERRQRKRHHDTTDDVSSERDDKEEHK
KSRRHGSDRKKPRKHEHSPDSDGESKHKRHKRDHRDGSRRSGAHDDLEDGELGEDGEIS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgcacaaaattttggccctcctcctgtacctgcacagtttcgtcctgccgtc
ccagggcagcaggggcagccatatttacctgggtcttctccgcagttcccttcggctggc
cagaatatgcctgggcagaatatgccttctggtcctaatcaacctatgcaccataatcaa
ccaatgcagttttctcaacccatgcaacagttacctccgagacctgggatgcctggtgtt
cctttttcgtcacaaggtatgggtatgtcatatggtcagcaaaacaggcctatgacattg
ggtgctcagcagaatcagcattctgcaccaccttttggcaatcacacatctggtgtaggt
ggcatgggagttcctttttcttcatcgtatacatttcaaccagtttcccacttgccaact
cctgcagcaccggttgctggacatccatggttatcatctggtggtcaaagctctgcacct
tttgtgccagttccaccaacagcagaacagtctccagtttcttctaccattggtcttgct
gttaatcttcctgatactagtcaacagtcctcatctgattggcaagagcacaccactccc
gatggcagaaggtactattataacaaaaaaacaaagcaatctagctgggagaagccttca
gaactgatgaccccactggagagagctgatgcatctactgtgtggaaggaatttacgact
ccagaagggaagaagtattactataacaaggctacgaaggaatcaaaatggaccatacct
gaggagttgaagttggcgcgtgagagagctgaaaaagcagctagtcagggagcacagttg
gaaacaggggtgaattctcaatccaagccagctggaagtttaacccctgaggaagcacgt
acagctgctgccgttctcgccagctccaatgtatcatcatctgccactttaagtgttcca
ccagctgtcaacccatcacctttggttaatgctgcgtcagcagaaatccctgtggggcat
tcagctgctccgaccagcatggctgtaacaaacactcctgcagtaactgcacctctgtca
gctttcactactggagatcctgggcttcctgcttcctcaaatgccccccttataacagtg
aatgctgcagacaaattacagtctcaagaaaccttaactcctatggatggagctcctgtg
caggatcatgaggaagcgcacaaagggatgttagctgctgcgaaaggtgatttgattgag
aaaccagcggatgacgaacctttggtttttgcgagcaaacaggaagcaaaagctgcattt
aagtcacttcttgagtctgcaaatgttcagtctgattggacctgggatcaggcaatgagg
gtgatagtcaatgacaagaggtatggtgctctgaagacgttaggagagcgaaagcaagca
tttaacgagtatttgggtcagcggaagaaacaggaggctgaggagcgacgcatgaggcaa
aagaaagccaaggaagagtttatgaaaatgctggaagagtcggaggtactgacatcatct
ataaaatggagtaaagctattactatgtttgaagatgatgaacggttcaaagctgttgaa
aagcccaaagacaggcaagagcttttcgagaattacttggtggaactccaaaaaaaggaa
aaggagaaggcagaagaagagtataggcggaatagagaagaatactggaagtttcttgaa
tcttgtgactttattgaggcaaacagcctatggagaaaagttcaggaccgcttggaggat
gatgaaagatgctcacgtcttgaaaagattgatcgcttagaaatatttcaggattatata
cggtatttggagaaggaagaagaggaacagaagaagcttcagaaggagcaattgaggaga
gtagagcgaaagaatcgtgatgaatttcgcaagatgttggaggttgatactgcagctggt
gctctcactgcaaaaacaagctggcgtgaatattgtggcaaggtcaaagactctcctgct
tatcttgctgtagcacgcaacacatctgggtctactccgaaagatttgtttgaggatgtg
gttgatgaattggaaaaccagtaccacgatgacaaaagtagaataaaagatgcgatgaag
ttgtgcaagattgttatgacttcaacttggacctttgaggaatttaaggcatctatttcc
ttggagcttgggtctccactaatagcagatatcaatttgaagttggtatttgaagagcag
ctcgagagggtcaaagaaaaggaggagaaagaagctaaaaagcgccagcgtcttctcgat
gactttactgatctgttgcgttctcttaaggaaataactgtgtcttctttgtgggatgat
tctaaacaactctttgaagaaagtgaagaatacagggaaattgacaatgaaatattggcg
aaggaggcctttgaggattatgttgtgtacctgcaagagaaggcgaaagagaaggaacga
aagcgtgaggaggaaaaggcgaaaaaggagaaagagagagaagaaaaggagaagaggaag
gagaaggataggaaggaaaaagataaggatcgtgaccgagaaaagcggaaagaacgctct
aagaaagaggaaacagatgatgaagctatggacgcaactgatagtcataatagctacaag
gacgagagtagaaaggagaaggaaaaagacagagacagaaagcataggaagcggcaccat
gataccactgatgatgtaacttctgacagggatgatgatagagagagacgtcaacgaaag
cggcaccatgataccactgacgatgtcagttctgaaagagatgataaagaggagcacaag
aaatctcgcagacatggtagcgaccgtaaaaaacctcgtaagcatgaacactcacctgat
tcagatggtgagagtaaacataaaagacacaagagggatcaccgggatggttctcgtaga
agtggtgcacatgatgatcttgaagatggggagcttggtgaggatggtgaaatctcgtag
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integrated database retrieval system