Beta vulgaris (sugar beet): 104905730
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Entry
104905730 CDS
T03548
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104905730
09123 Folding, sorting and degradation
03018 RNA degradation
104905730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104905730
03041 Spliceosome [BR:
bvg03041
]
104905730
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104905730
mRNA degradation factors
5'-3' decay
Lsm complex
104905730
Spliceosome [BR:
bvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104905730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104905730
NCBI-ProteinID:
XP_010692642
UniProt:
A0A0J8B1X8
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Position
1:complement(87489..93274)
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AA seq
98 aa
AA seq
DB search
MATGPGLEPLVDQMISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLG
LYIIRGDNIGVIGELDEDLDAHIELPQLRGHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggctactggacctggacttgagcctcttgtagatcaaatgatttcagttattaccaat
gatggacgcaacatagtgggaatcctaaaaggttttgaccaggcaacaaatataattctt
gatgaatcacatgagagggttttttctaccaaggaaggagtccaacaaattgtattgggt
ttgtacatcatcaggggtgacaatataggcgttatcggtgagctggatgaagacttggat
gctcatattgagctaccgcagctaaggggccatcctctgaagcctgtcattcactga
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