Beta vulgaris (sugar beet): 104905956
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Entry
104905956 CDS
T03548
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104905956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104905956
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104905956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DUF5785
Motif
Other DBs
NCBI-GeneID:
104905956
NCBI-ProteinID:
XP_010692922
UniProt:
A0A0J8BHD1
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All DBs
Position
2
Genome browser
AA seq
1312 aa
AA seq
DB search
MRRRSLHRSLHPFDDHAFEVFYQGLWKTVDRLRISCGTITFSFLDLGYLFEEKSFLSTLR
LRPRRATMTDCTCVLRPGADVSVFSASDNSDESSEDSPSGWFDARITSIERTPHESECNC
KFYIKFYYINDDTGTDRRKLSKEVETIGISEISIFQVLEQKPSENTHYRWHLAEDCTSLS
RTKLFLSKFASDVTWLLVASVQKQTVFDVRSIEKKLVYQILDTNFSPYSSSVQLSGVNFR
IDGETTISTVFPFVPVAKDEAPPVQEVTEEEDPLERYELTELRRSKRRNVQPERYLGEIG
LEATDTTALRIGYKFWNPDDLAIVLVNEDDANVSVLEDPQQNVPQTIEEYSEESTRLISK
IGVEAKEENLIMNFRSEEMSKDGDAQQRKRKYVKREKESKGKNVEKEKQDKYDHLAIVPL
LDESNQMPREQSHLLNEIRQNPLDIDDDNVPLKFYKRRFRERRTTTTTSTTARMKKISEL
DDYYDNGPVYGRKNSTYKQCQKNKHRPISSSSRSDKYSDDPSRKKKTLDISVYKDLISTY
MKNIQLTIENKLPISTDAWKNLQGASAMYEKKAAADAAPAPEEEEEESETEMLFRELELC
LASAYYEEDTKAADSDEPVEKFFKNDGSCQHVYTIDDEIGILCRLCGYVITEIRDVSPPF
MRQSGYTAKHDRSDKIEKDDTEHKLLDEACADLVYNPASYDTLVSESNDNVWGLIPNIKK
KLHDHQKKAFEFLWRNLAGSLIPSEMEPSSKKVGGCVISHTPGAGKTFLIIAFLVSYLKL
FPGKRPLVLAPKTTLYTWYKEIIKWEFPVPVYQIHGRRTYRDRIYMQKVGTCSSTVVPNG
DIMHVLDCLEKIQKWHAHPSVLLMGYTSFLSLMREDSKYAHRRYMGQILRESPGILILDE
GHNPRSTKSRLRKALMRVDTEFRILLSGTLFQNNFGEYFNTLCLARPRFVNEVLRVLDPK
YKKKIKGQNKTRTSIENRARKVFMDIIAKKINSNETEERDDGLNMLKNMTNKFIDVYEGG
SSENLPGLQSYTLMMKPTPLQHEILVRLHKHMNVARGFPLELELMITLGSIHPWLIKSAV
CANKFLSLEELQSLDEFRLDPTKGSKVKFVLGLVQRSIIRREKVLIFCHNIAPINLFLEL
FERIYGWRKGHEVLVLQGDLELFERGRVMDKFEERGGPSKVLLASINACAEGITLTAASR
VVLLDSEWNPSKQKQAIARAFRPGQEKIVYVYQLLVNGTLEEDKHGRTTWKEWVSCMIFS
EEHVDDPSKWQAEKIEDALLREIVEEDHAKSFHMIMKNEKASYENPLKVIHE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacgaagtcttcatcggtccttacatcctttcgatgaccatgcctttgaggtc
ttctatcaaggtttgtggaaaactgtggatcgcttaagaatcagctgtgggacaataacc
tttagcttcttggacctcggatatttattcgaggaaaagagtttcctctctaccctaagg
ttgcggccaagacgagcaactatgacggactgcacctgtgtactaagacccggtgctgat
gtttctgtgttttccgcatctgataattcagacgaatcatctgaagactccccctcagga
tggtttgatgctagaataacttccatcgagaggacaccacatgaatctgaatgcaactgc
aagttttacatcaaattctactacatcaacgacgatactggaacagacagaagaaaacta
agcaaggaagtcgaaactattgggattagtgaaatatctatctttcaagttctagagcaa
aagccttctgaaaatacacactataggtggcaccttgcagaagattgcacatcattgtca
aggactaaattatttctatcaaagtttgcttctgatgttacttggctgctcgttgcgtca
gttcagaagcagactgtgtttgatgtaagatcaatagaaaagaagctagtctatcaaata
ttggacacaaacttcagcccttactcaagttctgtccagctaagtggtgtaaatttcagg
atagatggtgaaactacaatctcaactgtttttccatttgttccggtggccaaagatgag
gcgccacctgtgcaagaggtgacggaggaagaggacccacttgaaagatacgagcttaca
gaattaaggcgatcaaaacgtaggaatgtacagcctgagcgatacttgggtgagatcggc
ctcgaggcaactgatactacggcactcagaatagggtacaagttttggaatccggatgat
ttagccattgtgcttgtaaatgaagacgatgcaaatgtttctgttctagaagatcctcaa
cagaatgttccacagactattgaggaatattctgaggaaagtactcgtcttatttcaaag
attggagtcgaggcaaaagaagagaatctcattatgaattttcgaagtgaggaaatgagt
aaggatggagatgcccaacagaggaagaggaaatatgtcaaaagagagaaagagagtaag
ggaaaaaatgttgaaaaagagaaacaagataagtatgaccaccttgctattgttcctttg
ctagatgaaagcaatcagatgcctcgggaacaaagtcatctccttaacgagatccgtcaa
aatcctctcgatatagatgatgataatgtccccttgaagttctacaagagaagatttaga
gagcgcaggacgacaacaacaacatcaacaacagcacgcatgaaaaaaatctcagagttg
gatgattattatgataacggaccagtatatggtagaaagaactcgacatataaacaatgt
caaaagaataagcatcgccctatatcttcttcttctaggagtgataagtactctgatgat
ccatcaagaaagaagaaaacattagatatatctgtttacaaggaccttatatcaacttac
atgaagaacatacagttgacaatagagaataaattgccaatctctactgatgcatggaag
aaccttcaaggagcatcggctatgtatgaaaagaaggctgctgctgatgcagctccagct
cccgaggaggaggaagaagagtcggagactgaaatgttgtttagagaattggaactttgt
ttagcttcagcatattatgaggaggatacaaaggctgcagattctgatgaaccagtggag
aagttcttcaaaaatgatggatcttgtcagcacgtgtacaccatagatgatgagatcggt
attctatgtcgattatgtggatatgtaatcactgaaattagagatgtctcccccccattt
atgcggcaatcaggatatacagcaaaacatgacagaagtgataagatagaaaaggatgat
acagagcataagctgctggatgaggcatgcgctgatcttgtctataaccccgcttcctat
gacactcttgtgtctgaatcaaatgacaatgtctggggtctaattccaaatataaagaaa
aagttacatgatcatcaaaagaaagcattcgagtttctctggagaaatcttgcagggtct
ttgataccttcagaaatggaaccatcaagcaagaaagtgggtggttgtgtaatttctcat
actcctggtgctgggaaaacttttcttatcattgcattcctcgtaagttacttgaagcta
ttcccgggaaagaggcctttagtccttgcaccgaaaacaacactttatacatggtataag
gaaatcataaagtgggaatttccggttccagtgtatcaaatacatgggcgaagaacctat
agggatagaatctacatgcagaaagttggaacttgctcgtcaactgttgttccaaatgga
gatatcatgcatgttcttgattgcttggagaaaattcagaaatggcatgctcaccctagt
gttcttcttatgggttacacctcctttttatcactgatgcgagaagactcaaagtatgcg
catcgtaggtacatgggtcaaattctgagggaaagcccagggattttgatacttgatgaa
gggcacaacccaagaagtacaaagtcaagattaaggaaagcattgatgagagttgacacg
gaattcagaattttgctctcaggaactttgtttcagaacaactttggtgagtatttcaac
acactttgcttggcaaggccaagatttgtgaatgaggtacttcgggtgctggacccgaag
tacaagaagaaaataaaggggcagaataaaacgcgaacttccatagaaaaccgagcaagg
aaggtgttcatggatatcattgcaaagaagataaactcaaacgagacagaagagagagac
gatgggctaaacatgttgaagaacatgacgaataaatttatcgatgtatatgaaggtggg
agctcagagaacctgcccggccttcaaagttatactttaatgatgaagccaactcctttg
cagcacgaaattcttgtgagacttcacaaacacatgaatgtggctcgaggttttccttta
gagctcgagctcatgattacccttggatccatccatccatggttgataaaatctgcagtt
tgtgcaaacaagttccttagcttggaggagctccagagccttgacgagtttaggctggac
cccacaaaaggttcaaaggtgaaattcgtcctaggacttgttcaacggtctataataaga
agagagaaggttttgatcttttgccacaacatagcgccaataaacctcttcctcgagctt
ttcgagaggatatatgggtggaggaaaggtcatgaagttctcgtccttcaaggggatctc
gagctctttgaaagaggtcgggtaatggataaatttgaggaacgtggtgggccgtcaaag
gttttacttgcttctatcaatgcttgtgctgaaggtattactttgacagctgcctcgagg
gtggtcttgttagactctgaatggaacccctcaaagcaaaaacaggccattgctcgggct
ttcaggcccggtcaagaaaagatagtgtatgtttatcaactcttggttaacggcacattg
gaggaagataagcatggtagaacaacatggaaagaatgggtttcttgtatgatattcagt
gaagaacatgtggatgatccttcaaaatggcaagccgagaagatcgaagatgctttgttg
agagagattgttgaggaagatcatgctaagtctttccatatgatcatgaagaatgaaaag
gcttcttatgagaaccctttgaaggtgatccatgaataa
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