Beta vulgaris (sugar beet): 104907203
Help
Entry
104907203 CDS
T03548
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104907203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104907203
03009 Ribosome biogenesis [BR:
bvg03009
]
104907203
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104907203
Spliceosome [BR:
bvg03041
]
Complex A
U1 snRNP components
U1 related factors
104907203
Complex B
104907203
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
104907203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
104907203
NCBI-ProteinID:
XP_010694397
LinkDB
All DBs
Position
4
Genome browser
AA seq
709 aa
AA seq
DB search
MAAMTTASPGPRYAPEDPSLPKPWKGLVDGRTGYLYFWNPETNVTQYERPVSRPLSGYIS
SLAEVQQSSKRKDAYNADDDKYVKVANGEKSQQMVRSGSTPNEAVVGSTPQHEPVDAVCG
LSAEAYRHRHEISVSGDSVPPPFTTFEATGFPSEILKEAHQAGFSAPTPIQAQSWPIALQ
GRDIVAIAKTGSGKTLGYLLPGFMHLKRCHNNSRMGPTVLVLSPTRELATQIQDEAVKFG
RSSRIACTCLYGGAPKGPQLKELDRGVDIVVATPGRLNDILETRRISLNQVSYLVLDEAD
RMLDMGFEPQIRKIVKEVPNRRQTLMYTATWPKEVRKIAADLLSSPVQVNIGNTDELVAN
KSITQYVEVLTSMEKQRRLEQILRSEEPGSKIIIFCATKKMCDLLTRNLSRQFGAAAIHG
DKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGIEDYVHRIGRTG
RAGATGLAYTFFADQDSKYASDLVKILEGANQKVPQEVRDMALRGGGMGRSRRPWGSGPG
GRDGGRGGRSELSYGGRDGGRDRDRYDRGYNGSYDGDTRGKYDRGYQSKFIRSGEGDRGR
SPSPSGQKAWGGTQVKNQGGNLRKSRSRSPERLNHGPPGRSFHEMMMERARSSPPKHQQK
SSAAEYGNGQSEWGKSVAKADNEVTIGRNRSYCGEDEEEEGAIRPDGHM
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctgctatgactacagcttcacctgggccacgctatgcacccgaagatccatcgtta
ccgaagccatggaaagggttggtggatgggagaactggatatctctacttttggaatcca
gagactaacgtcacacagtatgagaggcctgtttcaaggcctttatcaggttatataagt
tctttggcggaagttcagcagtcctctaaacgtaaggacgcatataatgctgatgatgat
aaatatgttaaagttgccaatggagaaaagagtcaacagatggtcagaagtggaagtact
ccgaatgaagcagttgtgggttccactccacagcatgaacctgtggacgcagtttgtggt
ctatcagctgaagcttatcgtcatcggcatgagatatctgtttctggagatagtgtgccc
ccaccatttacaacctttgaagctactggtttcccttctgagatcctgaaagaggcacac
caggctggtttttctgctcctactcctattcaggcacaatcatggccaattgcactacaa
ggtcgagatatagttgcgattgctaagactggttctggaaagaccttaggctacctactt
ccaggttttatgcatctcaaaaggtgccacaacaattcacggatgggaccaaccgtgttg
gttttgtcaccgacaagggaattggcgacacagattcaagatgaggctgtgaaatttggg
aggtcttctagaatagcttgcacgtgcttatatggaggagcacccaaaggcccacaattg
aaggagttggatagaggagttgatatagtggtagctactcctggtcgcttgaatgatata
cttgagacaaggagaattagcttgaatcaggtctcctacttggtgcttgatgaagcagat
cgtatgctggacatgggttttgagccacaaatccgaaaaattgtaaaggaggttcccaat
cgccgccaaactctgatgtacaccgcaacatggcctaaagaggtccggaagattgcggca
gatttattgtcaagtcctgtccaagttaatattggtaatacagatgaactcgttgctaac
aagtctatcacacagtatgtggaagtgctcacctctatggaaaaacaaagacgattggag
cagattttgagatccgaagaaccaggatcaaagatcatcatcttttgtgcgactaaaaag
atgtgtgatcttcttactcgtaacttgtcacgtcaatttggagcagctgcaattcacggt
gacaagtcccagagtgaacgagaccatgtgctaaaccagttccgaactggcagatctcct
gtactggttgctacagatgttgcagcccgtggtttggatataaaagacataagggtggta
gtaaactatgactttcctacaggaattgaggactacgttcacagaattggaagaactgga
agagcaggtgcaactggattggcgtatacattctttgctgaccaggatagtaaatatgct
tctgatcttgttaagattctggaaggagcaaatcaaaaagttccgcaggaagtccgtgat
atggcgctccgaggtggtggcatgggcaggtctagacgtccatggggttctggccctggc
ggtcgggatggaggccgaggtgggagaagcgaattgagttatggtggcagggatggagga
agggatcgtgatagatatgatcgaggatacaatggtagttatgatggcgatactcgtggg
aagtatgatagaggttatcaatccaagtttattcggagtggggaaggggatagaggccgc
agtccaagcccaagtggtcagaaggcatggggtgggacgcaagtgaagaatcagggcggg
aaccttaggaagagtagaagccgtagtcctgagaggctaaatcatggtccacctggacgg
agttttcatgaaatgatgatggaaagggctcgctcttcccctccaaagcatcagcaaaaa
tcttcagctgctgagtatggtaatggccagtctgagtgggggaaatcagttgctaaagct
gacaatgaagttacaatcggtaggaacagatcttattgcggagaggacgaagaagaggaa
ggtgccattcgtcctgatggacatatgtga
DBGET
integrated database retrieval system
