Beta vulgaris (sugar beet): 104907291
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Entry
104907291 CDS
T03548
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104907291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104907291
03009 Ribosome biogenesis [BR:
bvg03009
]
104907291
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104907291
Spliceosome [BR:
bvg03041
]
Complex A
U1 snRNP components
U1 related factors
104907291
Complex B
104907291
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
104907291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
104907291
NCBI-ProteinID:
XP_010694508
LinkDB
All DBs
Position
4
Genome browser
AA seq
716 aa
AA seq
DB search
MAATATASAGPRYAPEDPSLPKPWRGLVDGKTGYLYFWNPETNITQYERPGSSSHGSPIP
SRPYSVYISSSAEVPQSSNGRNDDADKSEGTSAEKSQQMARSGSTPNEAVIGSTRQHEPV
NTGCGLSAEAYRRRHEISVSGDNAPLPFTTFEATGFPSEILKEAHQAGFSAPTPIQAQSW
PIAIQGRDIVAIAKTGSGKTLGYLLPGFMHLKRCRNNPQMGPTVLVLSPTRELATQIQDE
AVKFGRSSRIACTCLYGGAPKGPQLKELDKGVDIVVATPGRLNDILETRRISLNQVSYLV
LDEADRMLDMGFEPQIRKIVKELPTRRQTLMYTATWPKEVRKIAADLLSNPVQVNIGNTD
ELVANKSITQYVEVLTSVEKQRRLEQILRSEEPGSKIIIFCATKKMCDLLARNLSRQFGA
AAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGIEDYVHR
IGRTGRAGSSGLAYTFFADQDSRYASDLVKILEGANQKVPQEIRDMALRGGGMGRSRRPW
GSGPGGRDGGRGGRSELSYGGRDGGRGRDRYDRGYNDSYDGDARGKYDRGYQSKSFRSGE
GDRGRSPSPSGQMAWGGTQVKDQGWNRGKSRSRSRSPERLTRVPPGRSFHEMMMERARSS
PPKHLQKSSAAEYGNGQSAWGKSVAKADNEVTIGRNRSYCGEDEEEEGAIRPDGHM
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacggctacagcttcagctgggccacgctatgcacccgaagatccttcgtta
ccgaaaccatggagagggttggtggacgggaaaactggatacttgtacttttggaatcca
gagactaatatcacacagtatgagaggcctggttcatcttcccatggtagtccgatcccg
tcgaggccttattcagtttatataagttcttcggcggaagttccgcagtcctctaatgga
cgtaatgatgacgctgataagagtgaaggtaccagtgctgaaaagagtcaacagatggcc
agaagtggaagtactccaaatgaagcagttattggatcaactcgtcaacatgaacctgtg
aacacgggctgtggtctatcggctgaagcttatcgtcgtcggcacgagatatctgtttca
ggagataatgcacccctaccatttacaaccttcgaagctactggattcccttctgagatc
ctgaaagaggcacaccaggctggcttttctgctcctactcctattcaggcgcaatcatgg
ccgattgcaattcaaggtcgagatatagtggctatagctaagacaggttctgggaagacc
ttgggctatctacttccaggttttatgcatctcaagcggtgccgcaacaatccgcaaatg
ggaccaactgtattggttttgtcaccaacaagggaattggcaacacagatccaagacgag
gctgtgaaatttgggaggtcctctagaatagcttgcacgtgtttatatggaggagcaccc
aaaggcccacaattgaaggagttggataaaggagtcgatatagtggtagctactcctggt
cgattgaatgatatactcgagacaaggagaattagcttgaaccaggtctcctacttggtg
cttgatgaggcagatcgtatgctggacatgggttttgagccacaaatcaggaaaatagta
aaggagctaccaactcgccgccaaactctgatgtacactgcaacatggcctaaagaggtt
cggaagattgctgcagatttattgtccaatcctgtccaagttaatattggtaataccgat
gaactcgttgctaacaagtctatcactcagtatgtggaagtgctcacttctgtggaaaaa
caaagacgattggagcaaattttgagatcagaagaaccaggatcaaagattatcatcttt
tgtgcgactaaaaagatgtgtgatcttcttgctcgtaacttgtcacgacaatttggagca
gctgcaattcatggtgacaagtcccagagtgaacgagaccatgtactaaaccagttccga
actggaagatctcctgtgctggttgctacagatgtggcagcccgtggtttggatataaaa
gacatcagggtggtagtaaactatgactttcctacaggtattgaagactacgttcacagg
attgggagaactggaagagcaggttcatctggattggcttatacattctttgctgatcag
gatagtagatatgcttctgatcttgttaagattctggaaggagcaaatcaaaaagttcca
caggagatccgtgatatggctctccgaggtggtggtatgggcaggtctagacgtccatgg
ggttctggccctggtggccgtgatggaggtcgaggtgggagaagtgaattgagttatggt
ggcagggatggaggaaggggccgtgatagatatgatcggggatataatgatagttatgat
ggcgatgctcgtgggaagtatgatagaggttaccaatccaagtcctttcggagtggagaa
ggggataggggccgcagcccaagcccaagtggtcagatggcttggggtgggacgcaagtc
aaggatcagggctggaaccgtgggaagagcagaagccgcagccgcagccctgaaaggcta
actcgagttccacctgggcgaagttttcatgaaatgatgatggaaagggctcgctcttcc
cctccaaaacatctgcaaaaatcttcagctgctgagtatggtaatggccagtctgcgtgg
gggaaatcagttgctaaagctgacaatgaagttacaatcggtaggaacagatcttattgc
ggagaggacgaagaagaggaaggtgccattcgtcctgatggacatatgtga
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