Beta vulgaris (sugar beet): 104908084
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Entry
104908084 CDS
T03548
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104908084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104908084
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104908084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Nup96
Motif
Other DBs
NCBI-GeneID:
104908084
NCBI-ProteinID:
XP_010695456
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All DBs
Position
5
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AA seq
1133 aa
AA seq
DB search
MDYTSNYTPIGKRTRLQRSINMEKLLKANKKARIEAKTEFKKKKEKENGTGYFSMGRHDD
DDDDDGDDDVEAMVIDEAEFLKGIRHSEFEKNSPIKTEMGVDETANLGTFDDVHHVDNVF
DEGLGEKKEMGIKNDYLLGEDSDNSVEIIEERWNPLGMDDDGSEDDDDNGDHHVTEDINE
KKAEYSGEKSVMSDVESSSSSSEEDDNVDTDHDFDEENPEDSSSSELLSSDDDDDHVHVH
EDGGDHVHVHHDDGGGDHVHDDGNGSRSVMKNKHERKKKVQVSSADYGKRATTIDNPIEK
NSPRKKSGTIHFPITVDETTPSPFPFSSPSGSRYRFRAHGKDSKLPDDGGEKTQERPPKK
ENVEVEPTLEKKQRKKKLKPKEIENILLNTILEKGNAELGDYFVTSMDHEEDLIRKFRFG
VKTVLPDEKSEYEIELESLFQELNFGLGVIDIGSETSCLDHNEKEDAVLCDSAIMQEKLC
SQGKHYLIHDEEIGIRCKFCLFVELEIRDVTPDFNKNLFGSSTHRYCGKFPNDTNVSSDR
FELPGSNNDFAADHENDTRGTVWDLIPGTKDNLYEHQQKGFEFMWTNVAGGIKLENLNNN
SKYGLGGCIICHAPGTGKTRLAIVFLQSFIKQYSMSKPIIIAPSSMLLTWEEEFARWNVD
VPFLNLNNAELSRKEIEALAYVDNLKNCKAVRETKLCIWAMGKGILGISYTLFEQLAGER
EDKEKKETHNKKDSYKKERYEIVKKALLEQTGVLILDEGHTPRNETSKIWKVLSEVKTKR
RIILSGTPFQNNFEELYNTISLVREEFGDPFNRGVYLKGGPKIRTDKKIEDLRNRMKHFV
HVHKGEILRTTLLGLFHSVLILNPSELQTTYFKHLANVRNGLKSDHLVSIASVHPWLLCT
SEPLPDFVDEKTLNKHKTDLAAGVKTQFLFELIKLSKGEKVLVFSQFLHPLTFIGDLLKL
HMNWSEGTEFLFMEGKQRPKLRQSLIKLFNDPGSEARVLLASTKACCEGIHLVGASRVVL
LDVVWNPSVERQAISRAYRLGQTKDVFVYHLITAGTLEGDKYYRQVEKDRLSEKVFTCTE
GEGGQNTTTLSSVSEDRILNEMRQHEKLQHMFKDIIYQPKADKLIESFGPLNQ
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggattacacttcgaattatacaccaattgggaaaagaacaaggcttcaaagatcaata
aacatggaaaaattactcaaggcgaataaaaaggcaagaattgaagctaaaaccgaattt
aagaagaaaaaagagaaagaaaatggtactgggtacttttcaatgggtcgtcatgatgat
gatgatgatgatgatggtgatgatgatgtggaagcaatggtgattgatgaagcagaattt
ttaaaaggaattcgtcattctgaatttgagaaaaattcacctataaagactgagatgggt
gttgatgaaactgcaaatttgggaacttttgatgatgttcatcatgttgataatgttttt
gatgagggtttaggtgaaaagaaagaaatgggtataaaaaatgattatttattgggtgag
gatagtgataattctgtggaaattatagaggagagatggaatcctttggggatggatgat
gatggttctgaagatgatgatgataatggggatcatcatgttactgaggacataaatgaa
aagaaagcagaatattcaggggagaagagtgtaatgtcagatgttgagtcttcttcttct
tcaagtgaggaagatgataatgttgatactgatcatgattttgatgaggagaatccggaa
gattcttcgagttccgagcttttaagttcggatgatgatgatgatcatgttcatgttcat
gaagatggtggtgatcatgttcatgttcatcatgatgatggtggtggtgatcatgttcat
gatgatggtaatggtagtaggtcagtcatgaaaaataagcatgaaaggaagaagaaagtg
caagtttcgagtgctgattatggaaagagagcaaccactattgataatcccatagagaaa
aattcccctaggaaaaaatcagggacaatccattttcctataaccgtggatgagacaact
ccatctccatttccattttcatctccatctggatctcgatatcgatttcgagctcatggc
aaggactctaagctgcctgatgatggtggagagaagacacaagagaggccacccaagaag
gaaaatgttgaggtagagcctacacttgagaagaagcagagaaaaaagaagctaaagcct
aaggaaattgaaaacattttgcttaatacaatcttggagaaagggaatgcagagttaggt
gactactttgtaacatctatggatcatgaggaggatcttatccgaaaatttcgctttggt
gttaagactgtgttacctgatgaaaaatccgaatatgaaatcgagttagaaagcctcttc
caggagctgaatttcggacttggagttattgatatcggttcagagacttcttgtttggat
cacaatgaaaaagaagacgctgttctttgcgatagtgcaattatgcaagagaaactttgc
agccaaggaaagcattatctaatacacgacgaagaaatcggaatcagatgtaaattttgc
ttgtttgtggagcttgagataagagatgtaacaccagattttaacaagaatctatttgga
agttcaacacacagatactgtggaaagtttccaaacgatacaaatgtcagctctgacaga
tttgagcttcctggttcaaacaatgatttcgcagcagatcatgaaaatgatactagaggt
acggtgtgggatctcattccaggaacaaaggataatctatatgagcaccagcagaaggga
ttcgagttcatgtggactaatgtagctggaggaataaaactcgaaaaccttaataacaat
tctaagtatggtctaggaggatgcatcatttgccatgctcctgggacagggaaaactcgg
ttagccattgttttcctacaatctttcataaagcaatactccatgtcaaaacctatcatc
attgctcctagtagcatgcttctcacatgggaagaggagtttgcgcgatggaatgtagat
gtcccttttttaaacctcaacaatgctgaactctctagaaaggagattgaggctcttgca
tatgtggataatctcaagaactgcaaggctgttagagagacaaagctttgtatctgggcc
atgggaaagggaatattgggaattagctacacgctgtttgagcaacttgctggtgagagg
gaagacaaagaaaagaaggaaacacataataagaaggactcatataagaaggaaagatat
gagatagtaaagaaagcccttcttgagcagacaggtgtattgattcttgatgaagggcac
acaccaagaaatgagactagtaagatatggaaggttttatccgaggttaaaacaaagaga
agaatcatactttcagggactccttttcagaataactttgaggagctgtacaatacaatt
tctctagtaagagaggagtttggagatccttttaaccgcggagtttatttgaaaggtggg
ccgaaaattagaacagataaaaagattgaggatttgaggaaccggatgaagcactttgtt
catgttcataaaggggagattttaaggacgactcttctcgggttgttccattcagtgctg
attttgaatccctctgagttacagacgacatattttaagcacttggcaaatgttagaaat
ggactaaaatcagatcacttggtatcgattgcttcagtacacccgtggcttttatgcacg
tctgaaccactgcctgattttgtagatgagaagacactgaataaacataaaacagacttg
gctgcaggggtgaaaactcagtttttgtttgagctgattaagcttagtaaaggggagaaa
gtgttggtttttagccaatttttgcatcccttgaccttcattggagatttgctgaaatta
catatgaattggagtgaggggacagagtttttgttcatggaagggaagcaaaggccgaaa
ctaaggcaatcattgatcaagctattcaatgacccaggaagtgaagcacgagttctacta
gcctcgacaaaggcatgctgtgaagggattcacctagttggtgcctcaagagtggtgttg
ctcgatgttgtatggaacccatcagttgaaaggcaagccataagccgcgcttataggcta
ggtcagacgaaggatgtatttgtatatcatttgatcaccgcgggaacactggaaggagac
aagtactacaggcaagtggaaaaagaccgcctttctgagaaagtttttacttgtactgaa
ggggaaggaggacagaacacaaccacattgtcaagtgtttcagaggatcggattctgaat
gagatgagacagcatgagaaattgcagcacatgtttaaggatatcatttaccagccgaaa
gctgacaagttaattgagagctttggtcctctaaaccaatag
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