Beta vulgaris (sugar beet): 104908089
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Entry
104908089 CDS
T03548
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104908089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104908089
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104908089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
104908089
NCBI-ProteinID:
XP_010695461
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All DBs
Position
5:233626..238312
Genome browser
AA seq
1082 aa
AA seq
DB search
MEFLPVGKRTRLQKAKMLKETNKRARLAAKREWRKRKEKVLVDNNGEKKVEILRVLKEEK
MEEEMEIEEDVVIIDKDEFFKDNFIGSKQNSQIEELGIIKKEAFDDDYDHDKHEAPLFLD
EKGKGIMMIDDVNGYGSDDSVQIIGERWNPLGLDGDYDDDDDDDDDDGDGENNDGASHSL
AVVMISDSDDEMKGIHNKDEAEKVGEMMKKEDVLTEESSDYEASSSEDDDDDVFDKDFVG
VEHESSHTSESSSSDGSVQEHEGELHFDDDNRQSRPDDDDVENDDDDDALRHKKKRVTID
KEVEKERRQEGGEKRKRGRPPKKKSVKLQKQSPPCRNVVKKSKDNEIQNTLLNTILEVGN
KGLDEIMSCKFEFYLPLKFKFGVEELILHEKTEEDLELDKLFKDFEFAIQASNIGSDDSS
LIQHDNRSDSENINPSNGALSQKDLCAKGKHYLVHDDEIGIVCKFCSYVNLEIKHVMPDF
NKDPFGRGDRRDYYCRFLYEGSMTYDRFQFLESSYDGRGDFSPSDDIQGTVWDLIPGVKK
TLYPHQRDGFEFIWRNIAGGIRMDELGKPTKFGLGGCIICHAPGTGKTRLAIVFLQSFMK
HYQNAKPVIVAPFPMLRTWEEEFGRWNVNIPFFNLNDNELSGKEDPKILGYVAKSSKDDK
TIRLVKLHTWASGNGVLCISYGLLQRLAGDKEGTDEKVRQVLLEQSGILVLDEGHTPRNE
KSNIWKVLSNISTKRRVILSGTPFQNNFEELHNTISLVRQEFGTPVFPGFYSKYERIEEL
RKKIKPFVHVHKGEILKETLKGLIHRLLILKPSPLQTRCFEQLVRIKNRFKFDNLVSIIS
VHPSIFCGRESKPAFVDEKFESLLKKHRMDLDAGVKTRFLVELIKLSKGERVLVFGQYIP
PLNFIADLLKSVFGWSMGSELLYMHGKQDVKERQSSIRLFNDPRSKARVLLASTKACCEG
IHLVGASRVVLLDVVWNPSVERQAISRAYRLGQLKDVFVYHLITSGTLEEEKYQRQATKE
RLSELVFSSAEENTENKSTRSRISEDRILKEMTDHEKMKHMFKRVIYQPKADNLIESFNM
VL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttaccagtaggaaagagaacaaggcttcaaaaagctaagatgttgaaggaa
acaaacaaaagagcacgtttagctgctaaaagggagtggaggaagaggaaagagaaagtt
ttagttgataataatggtgaaaaaaaggttgaaattttaagggttttgaaggaagagaag
atggaagaggaaatggaaatagaagaggatgttgtgattattgataaagatgaatttttt
aaagacaattttattggatctaagcagaattctcaaattgaggaattgggtataattaaa
aaagaagcttttgatgatgattatgatcatgataaacatgaagctcctctgtttcttgat
gaaaagggaaaggggataatgatgattgatgatgtgaatggttatggtagtgatgattct
gtgcaaattataggagaaagatggaacccattagggcttgatggtgattacgatgatgat
gatgatgatgatgatgatgatggtgatggtgagaataatgatggtgcctctcactctttg
gcagtggtgatgatttctgattcagatgatgaaatgaagggcatacataacaaagatgaa
gctgaaaaagttggggaaatgatgaaaaaagaagatgtgttaactgaggaatcttctgat
tatgaggcttcatcaagtgaggatgatgatgatgatgtttttgacaaggattttgttggg
gtggagcatgaatcttctcatacttctgagagttctagctctgatggttctgttcaagaa
catgagggagaattgcattttgatgatgataatagacaatcacgtcctgatgatgatgat
gttgagaatgatgatgatgatgatgcattgagacataaaaaaaagagagtgacaatagat
aaggaggtagagaaggagaggagacaagagggtggagaaaagagaaaaagagggaggcca
cctaagaagaagagtgtgaagttgcaaaaacaatcaccaccttgtagaaatgtagtaaag
aagtcaaaagataatgagatccaaaatactctccttaatacaattttggaggtgggaaat
aaagggttagatgagattatgtcttgtaaatttgagttttatcttccacttaagttcaaa
tttggagttgaggagttgattttgcatgaaaaaacagaagaagatctagaattagataag
ctcttcaaggactttgagtttgctatccaagcttccaacattggttctgatgactctagt
ctgattcagcacgacaatagaagtgacagtgaaaatattaatccttccaatggtgcactc
tcacaaaaggatctttgtgctaaggggaaacattatctcgttcatgatgatgaaatcgga
atcgtttgcaaattctgctcatatgtaaaccttgagataaaacatgtcatgccagatttt
aacaaggatccatttggaaggggggacagacgagactattattgcagattcctgtatgag
ggtagcatgacctatgacaggtttcaatttcttgagtccagctatgatggccgaggtgat
tttagcccttcagatgatattcaaggtacagtgtgggacctcatcccgggggtaaagaag
actttataccctcaccaacgtgatggatttgagttcatctggagaaacatagccggaggt
ataagaatggatgaacttggtaagcccacaaagtttggtttgggtggatgtatcatatgc
catgctcctggaactggaaagacccgtctagcaattgtttttctccaatcttttatgaag
cactaccaaaacgctaagcctgttattgttgcaccttttcccatgctccggacatgggag
gaagagtttggtagatggaatgtaaatattccatttttcaatttgaatgacaatgagctg
tcagggaaagaagacccaaagatccttggttatgttgcaaaatcatccaaagacgacaag
acaatccgccttgtcaagcttcatacttgggcctcagggaacggtgttctgtgtattagc
tatgggctccttcaaagacttgctggtgataaggaaggcacagatgagaaagttaggcaa
gttctccttgagcaatctggtatcctagtgttggatgaagggcatactcctaggaatgag
aaaagtaatatatggaaagtgttgtccaatatatcaacaaagagacgggtgatcttatca
ggaaccccatttcagaataactttgaagaacttcataacacaatttccttggttaggcaa
gagtttgggacccctgtttttccaggattttattcaaaatatgaaaggatcgaagagttg
aggaaaaaaatcaaaccctttgtgcatgtccacaagggggagattctaaaggaaactctg
aagggcttaatccatagattgctgattttaaagccttctcctcttcagacaaggtgcttt
gagcaattagttaggataaaaaacagattcaaatttgataatttggtctccattatttct
gttcacccttcaatcttttgtggacgggaatcaaaaccggcttttgttgacgagaaattt
gagtctttattgaagaagcacaggatggaccttgatgctggggtgaaaacccgatttcta
gttgagctcataaaactaagcaaaggagaaagagtgcttgtgtttgggcaatatatccct
cccttaaacttcatagcagatttactaaaatcagtttttggttggtctatgggaagtgaa
ttgctttatatgcatgggaagcaagacgtgaaggagaggcaatcctcgataaggctattt
aatgatcctagaagtaaagctcgggttcttctggcttcaacaaaggcttgttgtgaaggg
atccatcttgttggtgcctcgagggtagttttgcttgatgttgtatggaatccctcagta
gaaaggcaagcaataagtagagcatataggctgggccagctaaaagatgtgtttgtttat
catttaatcacctctgggactctggaagaagagaagtatcagaggcaggcaacaaaggag
cgtttgtcagagctagttttttcttctgctgaggaaaacacagagaacaagagtactagg
tcaaggatttcagaggatcgtatcctgaaagagatgactgatcatgaaaaaatgaagcat
atgtttaagagagttatctaccagccaaaagctgataatttgattgaaagctttaatatg
gtcctctga
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