Beta vulgaris (sugar beet): 104908225
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Entry
104908225 CDS
T03548
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104908225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104908225
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104908225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
104908225
NCBI-ProteinID:
XP_010695623
UniProt:
A0A0J8B8G8
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Position
5
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AA seq
944 aa
AA seq
DB search
MDDDLHFQDQNKLPELKLDAKQAQGFLSFFKTLPQDLRAVRFFDRRDYFTAHGENAAFVA
KVYYHTTTALRQLGSGSDALSSVTVSKSMFETIARDLLLERTDHTVELYEGSGSNWRLVK
SGSPGNLGSFEDILFANNEMQDSPATVALLPNFRENGCTVGLGYVDLTKRVVGLAEFLDD
SHFTNVESALVGLGCRECLLPVDAAKSTEGRGLLDALSRCGVMVTERKKSEFKARDLVPD
LGRLVKGTIEPVRDLVSGLEIAPAALGALLSYAELLSDESNYGNFTIKPYNLGSYMKLDS
AAMRALNVMESKNDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVSEINARLDLVQ
AFVEDIQLRQELRQHLKRISDIERLSRNLQKKRAGLQQVVKLYQSSIRLPYIKSALGRYD
GQFSAILKERFSEPLGIWSDDDHLNKFVSLVETSVDLDQLENGEYMISSGYDSRLLELKD
EQESLEGQIDSLHKQTADDLDLSADKVLKLEKGTQFGHVFRITKKEEPRIRKKLTTQFIV
LETRKDGVKFTNSKLKKLGDQYQRILDEYKNCQKELVQRVVHTAATFSEVFESLAALLAE
LDVLLAFSDLATSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGQ
SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRG
VSTFMQEMLETASILKGATDKSMIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFA
THFHELTALAHDNRGGEPSNRKIVGVTNYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIH
VAEFANFPGTVVSLAREKAAELEDFSPVTINADDISKEMRGKRKREFDPDAVSEGAARAH
RFLKEFAELPLEQMDLKQALQHVNKMKSDLEEDAENCHWLKQFL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatttgcatttccaggaccagaataagctcccagaactcaaactcgatgca
aaacaggctcaagggtttctgtcattctttaaaaccctacctcaggatttgcgggctgtg
cggtttttcgatcgtcgggactactttactgcccatggagaaaatgcagcttttgtcgct
aaggtttattaccacactactacagccttgcggcaattaggtagtggttctgatgcccta
tccagtgtaactgtaagtaaaagcatgtttgaaacaattgcccgtgatttacttttagaa
aggacagaccacacggttgagctatatgagggtagtggctctaattggagacttgtgaag
agtggaagtccaggaaacctaggcagttttgaagatattctgtttgccaataatgaaatg
caggactctcctgcaactgttgcattgttaccaaacttcagggaaaatggttgcacagtt
ggactgggttacgttgaccttactaagagagttgttggtttggctgaatttcttgatgat
agccacttcacaaatgtcgaatcagctttggttgggcttggttgcagggaatgcctactc
cctgtggatgctgctaagtctactgaaggaaggggattgcttgatgcattatcaagatgt
ggtgtgatggtaaccgaaagaaaaaaatctgagtttaaggcacgggatttagtgccagat
cttggaagacttgtcaaaggtacaattgagccagttcgtgatctagtttcaggacttgaa
attgctcctgctgctttgggggctttattatcttatgcagaattactttcagatgaaagc
aattatggaaattttactatcaagccttataatcttggcagttacatgaagctagactct
gctgctatgagagcattaaatgttatggagagcaaaaatgatgcaaacaaaaattttagt
ttgtttggtctgatgaatagaacctgtactgctggaatgggaaaacgtttgcttcacatg
tggttgaagcagcctttattagatgtgagtgaaataaatgctcggctggatcttgtacaa
gcttttgtggaggatatacaacttcgtcaagaacttaggcagcatctaaaaagaatatct
gatattgaacgattatcgcgcaatcttcagaagaaaagagctggtttacagcaggttgtg
aagctttatcagtcaagcatcagacttccatacattaaaagtgcactcggaaggtacgat
gggcaattttcagcaatactcaaggaaaggttctcagaaccccttggaatctggagtgat
gatgatcacttaaacaagtttgtgtcccttgttgagacttcagttgaccttgatcaactt
gagaatggtgaatacatgatttcatctggttatgattcaaggctccttgaactgaaagat
gagcaagagtcacttgagggacaaatagacagtcttcataaacaaactgccgatgatctt
gatctgtctgctgataaggtgctaaagttagagaagggtacacaatttggacatgttttt
agaatcacgaagaaggaggaaccaagaattaggaaaaagcttactacacagtttattgta
cttgaaacacgaaaggatggtgtcaaatttacaaattcgaaactcaaaaaattaggggat
cagtatcaaaggatacttgatgagtacaagaactgccaaaaggaattagtacagcgagtg
gttcacactgctgctaccttttctgaggtatttgagtctctagctgcattgctagctgaa
ctggatgtgttgcttgccttttctgacttggcaacaagttgtcctactccctatacaaga
ccagatataactccatctgatgttggagatatcatattggaaggcagtagacacccctgt
gtggaggcgcaggactgggtgaatttcataccaaatgactgtaaacttgtcagaggtcaa
agctggttccagattatcactggacctaacatgggtggaaaatccactttcattagacag
gttggtgttaatattttgatggcacaagtgggatcttttgttccttgtgacaaagccagc
atttctgtacgtgactgtatatttgctcgtgttggtgctggcgactgccaactgcgagga
gtgtccacttttatgcaagaaatgcttgagactgcatcaattttaaaaggagcaactgac
aagtcgatgataataattgatgaactgggacgcgggacgtcaacttatgatggatttggc
ctagcttgggcaatttgtgagcacattgttgatgtcatcaaggcaccaactttgtttgct
acccactttcatgaactcacggcattagctcatgataacagagggggagagccttcaaat
agaaagattgttggtgtaacaaattaccatgtcagtgcgcacatagattcgtcaagccgc
aagctaacaatgctgtacaaggtcgaaccgggggcttgtgatcaaagttttggcattcac
gttgcagagtttgccaattttcctggaacggttgtatctcttgcaagagaaaaggctgct
gagttggaagatttttcccctgtcacaattaatgctgatgatatttcaaaagagatgcga
ggaaaacggaagagagagtttgatcctgatgctgtctctgagggtgcagcaagggctcac
cggttcctgaaagagtttgctgagctaccgctagaacagatggacttgaagcaagcattg
cagcatgtgaataaaatgaaaagtgacttagaagaggatgcagaaaactgccattggttg
aagcagtttctttag
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