Beta vulgaris (sugar beet): 104908838
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Entry
104908838 CDS
T03548
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104908838
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104908838
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104908838
NCBI-ProteinID:
XP_010696303
UniProt:
A0A0J8B740
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Position
7
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AA seq
473 aa
AA seq
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MLQRSYIVQILVLCYVFAFGSSILNLTLPGQHPDPEAVAREVHRKVNVSLARRHLLEDEA
SNCMTGNPIDDCWRCDPNWHNNRQRLADCGIGFGQYALGGKGGEFYVVTDPSDDDAVNPK
PGTLRYAVIRTEPLWIVFASNMVIHLSQELIFNSYKTLDGRGADVHITGGGCIMLQFISN
IIIHNIHVHHCYQSGNTMVRSSPTHYGYRSLSDGDGISVFGSKDLWIDHCSLSHCKDGLI
DIIMGSTGITVSNNHFSHHNEVMLLGHSDTYEPDTGMQVTVAFNHFGPKLVQRMPRCRKG
YIHVVNNAFVQWEMYAIGGSGNPTINSQGNRFIAPFNPYAKEVTKRVDTNDNNWKGWNWR
SEGDEMMNGAYFVASGAGVEVKYEKAYSVEPKSAANLDQLVMYAGVLGDKRHSLGKWTAG
PGEKTGLNSDDYDYNDDYDGGTSSVSSPTYIFLFLLLTVSFLYLYAIPIINFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagaagctacattgtgcaaatattggtgctatgctatgtatttgcatttggt
tcgtccatcctcaacctcactctcccgggtcagcacccggacccggaagccgttgcccgg
gaagttcatagaaaggttaatgtttccctagctagaagacatttacttgaagatgaagcc
tccaattgcatgactggaaatccaattgacgattgctggagatgcgacccgaattggcat
aataaccggcaaaggttagccgattgcggcatcggatttgggcagtatgctcttggtggc
aaaggtggcgagttttacgtagtcaccgacccttccgatgatgatgctgttaatccaaaa
cctggtacccttcgctatgctgtcatacgaactgaacctctttggattgtctttgcttcc
aatatggtgatccacctttcccaggagctaatatttaacagttacaaaaccttagacggt
cgaggggcggacgttcacataacgggaggaggatgcataatgttacaattcataagtaac
attataatccacaacattcacgtccaccactgctaccaatctggcaacaccatggttcgg
tcgagcccgacccattacggttatcggtctttatccgatggtgacggaatctctgtattt
ggatccaaggacctttggattgaccactgctcattgtcccactgtaaagatgggctaatc
gacatcataatgggttcaaccgggatcaccgtgtctaacaaccatttctcccaccacaat
gaggtcatgctactaggtcacagtgacacatacgagccagatacaggaatgcaggtaacc
gtcgcattcaaccattttgggcctaagttagtacagaggatgccaaggtgtaggaaaggg
tatatacatgttgttaataatgcttttgtccaatgggagatgtacgccattgggggtagc
gggaatcctaccatcaatagtcaggggaatcgtttcattgctccttttaatccttacgcc
aaagaggtaacaaaaagagtagatacaaacgataataattggaaagggtggaattggaga
tcagaaggagacgaaatgatgaacggtgcgtattttgtggcgtctggggcaggagtcgaa
gtcaaatacgagaaagcatatagcgtggagcccaaatctgctgccaaccttgaccagctc
gtcatgtatgctggtgttctcggtgacaagagacacagtcttggcaagtggactgctgga
cctggtgaaaaaactggattaaattcagacgattatgattataatgatgactatgatggt
ggtacatcttcagtttcttccccgacatatatctttttatttcttttattgaccgtgtcg
tttctttatttatacgcaattcctatcatcaactttctatga
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