Beta vulgaris (sugar beet): 104908857
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Entry
104908857 CDS
T03548
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104908857
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
Other 90S particles
104908857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_PRP39_C
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
104908857
NCBI-ProteinID:
XP_010696324
UniProt:
A0A0J8B7U8
LinkDB
All DBs
Position
7
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AA seq
1896 aa
AA seq
DB search
MAPFNKNLKRKSREQRQNKPSKAGDTAPTQALPLQSDDDVPDFPRGGGSKLSREERDEIR
AGVDEEFDAKRRDTKKKKTGKGFKGSRKSNDDELGSLFGEGISGKLPRFANKITLKNLSP
GMKLWGVIAEVNEKDLAVSLPGGLRGLVRASEAVESALADNIKDLEGHVLSALYHVGQLV
SCVVLQVDDDKKESGKRRVWLSLRLSLLHKSYSLDAVQEGMVLTANVKSIEDHGYILNFG
VPSFTGFLPKKSEEDAMEFKLITGQLVQGVVKSIDKVRKVVYLSSDRDIVSKCVLKDLKG
ISLDLLVPGMMVNARIQTTLENGIMLSFLTYFTGTVDKFHLQNAFPASDWKKQYEKNKKV
NARILFIDPSSRAVGLTMNPHLLLNKAPPLLIKIGEIYEHSKIIRVDKDWGLLLEIPSPQ
APTPAYVTISDVADEDGIKLEKKFREGNDVRVRILGFRHLDGLAMGVMKASAFEGAVFTH
ADVKPGMIVKAKVIAVKSQDAIVQFHSGVKASCPLRHMSEFEIEKPRKKFKVGAELIFRV
LGCKSKRITVTHKKTLVKSKLSILSSYADATEGLVTHGWIMKIDNRGCTVRFYNGVQGFA
PRSELGLEPGCDTSSRYHVDQVVKCRVTSVSHGINLSFIISPTKLSEDDMVKLGSVVSGV
VELVMPDVVFLHVNVKGNMKGTIYTEHLADHQAQSAQMKSVLKPGHELSELLVLDIEGNN
LILSAKYSLIHAVPQLPADITQVTLNSVINGYVCNLIENGCFVRFLGRLTGFSPRKKALD
DRNTNLSDIFFVGQSVRCNIAEINNESGRLTLSLRQSSCSSTDASFLQSYFLTEEKIAEL
HMSDLRSSKFSWPENLNIGCVVEGRISEAKEFGVVISFEKYTDVFGFITQYQLRGKTPES
GSTVRAVILDVAKSERLVDLSLRPEFVEKSEGDASKSTISKKKRKRELKELKVHETVTAV
VEIVKEGYLVVSLPEHNFTIGYAAATDYNLQRLQRKQFSSGQRVVATIMALPSDSTAGRL
LLLLESSNQVVETSSSKKAKKKSEYDIGSQVHAEITDIKPLELRLKFGIGYRGRVHITEV
HDENVVEDPFSVYKVGQTLTARIVANCVKPENTKKGSLWELSIKPSTVSGSSLTKDVQIA
EAFDFSVGQHISGYVYKVDKEWVWLAVSRQVKAKLFILDSACEPGDLENFQKRFRVGATL
SGYILSMNREKMSLRLVMHPFSATSNGLFGGLKNCYTSDEKEVHHLQSGGVRGGRVWRIL
PGVGGMLVQVGPYLYGKVHYTELTDSWVSDPLSGYHEGQFVKCKILDVNNSANGNVHIDL
SLRSFEDAVIGDTRSSRIQKIEDLELDMVVNGYVKSITPKGCFILLSRHIDAKIKLSNLS
DGYVEDPMKEFPVGKLVKGKVLSVEPLSGRVEVTLKVDSKSSRSELSDLGCLSVGDVVKG
SIKRVVPFGLFIVIDNTNLNGLCHVSEISDDHVDNLDDHFRPGGRVTAKVLKVDTEKHRI
SLGMKSSYFEDELGNNHGMMEVDSVDDPTIVAQAKADMPQITHSDFLFEHEEGSALVQVE
SRASVPPLEVTLDDNEDDEVFALPDKKEIIVNGSSAIDEKNKRQAKKKAKEEKEQEIMAA
EQRLLERDIPRTTDEFEKVVRSSPNSSFVWIKYMQFMLSMADVEGARSVAERALKTINIT
CDNEKLNVWVAYLNLENQYGNPSEEAVAKLFQRALQYCDHLKLHLELLGLYERTEQHKLA
DELLDKMVKKFKQSCEVWLRRIQWLLKQKPDEVDKMMNRALLSLPKHEVVQFLSQVAILE
FKNGVPDKGRSIFEKMLREYPKRRDLWSVYLDQEIRLGDVDFIRALFERATSMSVPAKKM
KFLFKKYLNFEKSLGDEKRIQYVIQKAREYVETAAA
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatttaataagaatttgaagaggaaatccagagaacaacgccaaaataaacct
tcaaaagctggtgatactgctcctactcaggccttacctcttcaatctgatgatgatgtt
cctgattttcccagaggagggggaagcaagttgagtcgggaagagagagatgaaattagg
gctggagtcgacgaagagtttgatgcgaaacggagagatacaaagaagaagaaaacaggt
aagggttttaaagggagtcggaaatcgaatgacgatgaattgggttcgcttttcggagag
gggatttcggggaagttgcctaggtttgctaataagatcactttgaagaatctttctcca
gggatgaagttgtggggagtgattgcagaagttaatgagaaagatcttgcagtgagcctt
cctggtggtttacgcggattagttcgggctagtgaagcagttgaatctgctttagcagat
aatattaaggatttggagggtcatgtcctctctgcactgtatcatgtgggccagctagta
tcttgtgtagtattgcaagtggatgatgataagaaagagtccggaaagaggagggtttgg
ctttcattacgtctttctctgttgcacaagagctactctttggacgcagttcaagaaggg
atggtcttgactgcaaatgtgaaaagcattgaagatcatggttacattctcaactttggg
gtgccttcttttactggttttttgccaaagaaaagcgaggaagatgctatggagtttaag
ttgattacagggcagctcgtgcagggggttgttaaaagtattgataaagttcgtaaagta
gtttatctgtcttctgacagagatatagtgtccaaatgtgtgctgaaggatctcaagggt
atctcacttgatcttcttgttccaggcatgatggttaatgcccgaatacagactaccctt
gaaaacgggatcatgttatcattccttacttatttcactggaactgttgataagtttcac
ctgcagaatgcatttcctgcatctgactggaaaaagcagtatgagaaaaataaaaaggtc
aatgctcgaattctctttattgatccgtctagcagggctgtcggtttgacaatgaatcct
catctactcctcaacaaggctcctcctttgctcatcaagataggtgaaatatatgaacat
tcgaaaatcatcagagtagataaggattggggtcttttgcttgagattccatcccctcaa
gctcccactccggcgtatgtgactatatctgatgtggctgatgaagacggcattaagctt
gagaaaaagtttagggaaggaaatgatgttcgagtaagaatacttgggtttaggcacttg
gatgggcttgctatgggtgttatgaaggctagtgcttttgaaggtgcggtctttactcat
gcagatgttaagcctgggatgatagtgaaggctaaagtcattgctgtgaagagccaagat
gctattgtgcaatttcacagtggtgtcaaggcctcttgccccctacgacatatgtctgaa
tttgagatcgagaagcctcgtaaaaagtttaaggttggtgcggagttgatctttcgtgtt
cttggttgcaagtcaaagaggataactgttacgcataagaaaacacttgtgaaatcaaaa
ctcagcattctgagctcttatgctgatgcaactgaagggttagtaacccatgggtggatt
atgaagattgacaaccgtggatgcactgtccgattttacaatggagttcaaggatttgcc
cccagatctgagcttggtttagagccaggatgtgacacaagctcaagataccatgttgat
caagtagtaaaatgcagagtaacaagtgtttcacatggtatcaatcttagtttcattatt
tcaccaacaaagctttctgaggatgacatggtcaagttgggtagtgtggtatctggagtg
gttgagcttgtcatgccagatgtcgtattcttacatgtaaatgtaaaaggaaacatgaag
ggtacaatttatactgaacatttggctgaccaccaggcacaatctgctcagatgaagtcg
gtcttgaagcctggccatgaactttctgagctgctggttctagatattgaaggaaacaat
ttaatacttagtgcaaaatattctctcattcatgctgtaccacagcttcctgctgatatt
acacaggttactttgaactcggtgatcaatggttatgtatgtaatttgattgaaaatgga
tgttttgttcgctttcttgggcgtttgaccggcttctctccgaggaaaaaggcactagat
gacaggaacactaatctttctgatatatttttcgttggacaatctgtgcgctgcaatatt
gctgaaattaacaatgaaagtggtcgcttaacattgtcactaaggcagtccagttgctca
tctactgatgcttccttcctccaatcatattttctaacagaggagaagattgctgagctt
catatgtcggatttaagaagctccaagtttagctggcccgaaaatttgaatataggatgt
gtagttgagggtagaattagtgaggcaaaggaatttggggttgttatcagctttgagaaa
tatactgatgtttttggtttcatcacacagtatcagctgcgtggaaagactcctgaatct
ggctccactgttcgagctgttattcttgatgttgctaagtcagagcgcctagttgaccta
tctttgaggccagaatttgttgagaagtctgaaggggatgctagtaaatccacaatatct
aagaagaaaagaaaaagagaactgaaagaacttaaagtgcatgaaacagtaactgctgta
gttgaaatagttaaagagggttacttggtagtttcgttaccagagcataattttactata
ggatatgcagcagcaactgattacaatttgcaaaggttacaacggaagcagttctccagt
ggtcaaagagttgttgcaactatcatggcacttccaagtgattcaacagcgggcaggttg
cttttgctccttgaatcttctaaccaggttgtggagacgtcaagctcaaagaaggcaaag
aagaaatctgaatatgatattggctctcaggtccatgcagagattacagatattaaacct
cttgagctacgtttaaagtttgggattgggtatcgtgggagagttcacattacagaggta
catgatgagaatgttgttgaagatcccttctcagtatacaaagtggggcagacattgact
gctaggattgttgcaaattgtgtgaagccagagaacactaagaaaggcagcctgtgggaa
ctgtctatcaaaccatcgacggtatcaggttccagtctgactaaagatgtgcaaatagct
gaggcattcgacttttcggtaggacagcacatcagtggttatgtctacaaagtagataaa
gagtgggtctggttagcagtctctcggcaagtgaaggctaagcttttcattctcgacagt
gcatgtgaacctggcgatttggagaactttcagaagcgtttccgggtgggagctactctc
tctggatacatcttgagcatgaatagagagaaaatgtccttgcgtttagttatgcaccca
ttttctgccacctccaatggattatttggtggactgaagaactgttatacttcagatgag
aaggaagtgcatcatcttcagagtggaggtgttcgtggtggtagagtgtggaggattctt
ccgggtgttgggggaatgcttgtgcaggtaggaccttacctgtatggtaaagttcactac
actgagcttactgacagctgggtttctgatcccttatctggctatcatgagggtcaattc
gttaagtgcaaaatcctcgatgtcaacaactcagctaatggaaatgtccatattgactta
tcattgcgctcctttgaggatgctgttattggagacactcgtagcagtcgtattcaaaag
attgaagaccttgagcttgatatggtggtgaatggttatgttaagagtattactcccaag
ggatgcttcattcttctttccaggcacattgatgcaaaaatcaagctttccaacttgtct
gatgggtatgttgaagaccctatgaaggaatttccagttggtaaacttgttaaggggaaa
gtcctctctgtcgaacctttatcgggacgtgttgaagttactctgaaggtggatagtaag
agtagcagatctgagttgagtgatttaggttgtctaagtgttggtgatgttgtaaaaggt
agcattaaacgagtcgtaccttttggtctctttattgtgattgataacacaaacttgaat
ggattatgccatgtgtcagagatttctgatgaccatgttgacaatcttgatgaccatttc
agaccagggggaagagttactgcaaaagttttgaaagtggatactgaaaaacacagaata
tcacttggaatgaagtcttcatattttgaggatgagcttggtaataatcatggaatgatg
gaggttgattcagttgacgatcctacaattgtggctcaagcgaaggctgacatgcctcaa
attacacattcagatttcttatttgaacatgaagagggatcagctcttgtccaagtggaa
tcaagggcttctgtgcctcctctggaggttactcttgatgataatgaggatgacgaagtg
tttgctctacctgacaagaaggaaataattgttaatggttccagtgccattgatgagaag
aacaagaggcaggctaagaaaaaggccaaggaagagaaggaacaagaaatcatggctgct
gaacaacgtttgcttgagagagatattccgagaactaccgatgagttcgagaaagtagtt
agaagctcccccaacagcagcttcgtctggataaaatacatgcagtttatgctttctatg
gccgatgtcgagggagcccgatcagtagctgaaagggccttgaaaacaatcaacatcact
tgtgacaatgagaagctgaacgtatgggtagcataccttaatttggaaaatcagtatggg
aatccctctgaggaggcggtagcaaaactatttcagagagcactgcagtactgcgatcac
ctaaagttgcatttggagctattaggattgtatgaaaggacagaacagcataaattggct
gacgagcttcttgacaaaatggttaaaaagttcaaacagtcatgcgaggtatggctgagg
agaatccagtggctattaaagcaaaagcctgatgaagttgataagatgatgaatcgtgct
cttttatcactccctaagcatgaagttgtacagtttctttcacaagtggctatccttgag
tttaaaaatggggttccagataaagggcggtcaatatttgagaaaatgttgcgtgaatac
ccgaagaggagggacctgtggagtgtttatcttgatcaggaaattcgattgggtgatgtt
gactttatccgtgcgttgtttgagagagcaactagtatgagtgttccagcaaaaaagatg
aagttcttgttcaagaaatatctcaattttgaaaagtcacttggtgatgagaagcggatt
cagtatgtcattcagaaggccagagagtacgtagaaacagctgcggcatga
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