| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
bvi Burkholderia vietnamiensis G4
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bvi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcep1808_0322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bvi03021]
Bcep1808_0322
03400 DNA repair and recombination proteins [BR:bvi03400]
Bcep1808_0322
Enzymes [BR:bvi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcep1808_0322
Transcription machinery [BR:bvi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcep1808_0322
DNA repair and recombination proteins [BR:bvi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcep1808_0322
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:360360..364466
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| AA seq |
1368 aa
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVPATQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIASANDEVTESVLEKLREAGIKDIQTLYTNDLDQGPYISSTLRVD
ETTDRTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEI
VGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAIDENGQLIDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELRVFLTKIYNESGRQEDLESFTDEEILELAKNLREGVPFAT
PVFDGATEEEMGKMLDLAFPDDIAQQLDMNPSKNQVRLYDGRTGEQFERRVTLGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN |
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| NT seq |
4107 nt +upstreamnt +downstreamnt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgccccatc
gttcaccaagttccgttcttgctggccacccagcttgaatcattcagcacgtttctgcaa
gctgatgtgccggcaacgcaacgcaagcccgaaggcttgcaggccgcgttcacgtcggta
tttcccattgtttcgcacaacggtttcgcgcgcctcgagttcgtgagctatgcgctgtcc
tcgccggcattcaacatcaaggaatgccagcagcggggcctgacctactgctcggcgctg
cgcgcgaaggtccgcctcgtcatcctcgacaaggaatcgccgaacaagccggtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgacgggctcg
ttcgtcatcaacggcaccgagcgtgtcatcgtctcgcagctgcaccgttcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcacgg
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggccatcggcctc
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgctgatggacgaa
ggcgcgcaactcgagttcgtgcccgagcgcctgcgtggtgaagtcgcgcgtttcgacatc
accgatcgcgacggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctcgaagccgcgaagaccaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgataccggcgaagtgatcgcgagcgcgaac
gacgaagtcacggaaagcgtgctcgagaagctgcgcgaagccggcatcaaggacatccag
acgctctacacgaacgatctggatcagggtccgtacatctcgtcgacgctgcgcgtcgac
gaaacgaccgaccgtacggccgcgcgcatcgcgatttaccgcatgatgcgtccgggcgaa
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgtctgttctacagcgaagaagcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgaaatc
gtcggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgccgcgtgcgt
tgcgtcggcgaactggcggaaaaccagttccgcgccggtctcgtgcgtgtcgagcgcgcg
gtgaaggaacgcctcggtcaagccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgtgtttccgcactgggc
ccgggcggtctgacgcgcgagcgcgcaggcttcgaagtccgcgacgtgcacccgacccac
tatggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggcctgatcaactcg
ctcgcactgtacgcgcacctgaacgagtacggcttcctcgagacgccgtaccgcaaggtc
gtggacagcaaggtgaccgaccagatcgactacctgtcggcgatcgaggaaggccgctac
atgatcgctcaggcgaacgccgcgatcgacgagaacggccagctgatcgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggatcgcatccagtacatggac
gtcgcgccgtcgcagatcgtgtcggtggcagcttcgctgattccgttcctcgagcacgac
gacgcgaaccgtgcactgatgggctcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagccggtcgtcggtacgggcatcgagcgcacctgcgcggtcgactcgggcacg
acggttcaggcgttccgcggcggtgtggtcgactacgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgacgaagcggtcgcaggtgaagtcggtgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgacggcgcctcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaagac
tcgatcctgatctcggagaaggtggtcgcggacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgttgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gctgaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgaaacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcttcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgtccaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacttgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcccgcatgctggtgggcaaggtcgcgaacggcggtccgaagaagctcgcgaagggc
acgaagatcgaccaggcttacctggaagatctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaagcagcggcgcagctcgaagcgatcaagaactcgatcgaagagaag
cgtcaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgcctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgtcccg
atcgaagacatgccgtacatggccgacggccgtccggccgacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggtgctcgaagttcacctcggctgggccgcg
aagggtctcggctggcggatcggcgaaatgctgcagcgtcaggcgaagatcgaggaactg
cgcgtgttcctgacgaagatctacaacgagtcgggccgccaggaagatctggaaagcttc
accgacgaagagatcctcgaactcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggtgcaaccgaggaagaaatgggcaagatgctcgacctcgcgttcccg
gacgacatcgcgcaacagctcgacatgaacccgtcgaagaaccaggtccgcctgtacgac
ggtcgcacgggcgagcagttcgaacgtcgcgtgacgctcggctacatgcactatctgaag
ctgcaccaccttgtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcagccgctgggtggtaaggcgcagttcggcggccagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggacgaaggtctacgagaacctcgtcaagggcgatcacgtg
atcgatgcaggcatgccggaatccttcaacgtgctggtgaaggaaatccgctcgctcggt
atcgacatcgatctcgaccgcaattaa |
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