Burkholderia vietnamiensis G4: Bcep1808_0356
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Entry
Bcep1808_0356 CDS
T00493
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcep1808_0356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvi03021
]
Bcep1808_0356
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_0356
Enzymes [BR:
bvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcep1808_0356
Transcription machinery [BR:
bvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcep1808_0356
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcep1808_0356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABO53369
UniProt:
A4JAR6
LinkDB
All DBs
Position
1:388979..389956
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccacaccttgggcaacgcgctg
cgccgcgtgctgctgtcgtcgatggtcggctacgcgccgaccgaagtgacgatcgccggc
gtggtgcacgagtattcgacgctcgacggcgtgcaggaagacgtggtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcacaaccgtgacgaagtcacggtcacgctgcgc
aaggaaggcgaaggcgtcgtcacggccggcgatatcgagctcgcgcacgattgcgaagtc
atcaacccgaatcacgtgatcgcacatctgtcgaagggcggcaagctcgacgttcagatc
aagatcgagaagggtcgcggctacgtgccgggcaacgttcgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tatgcagtcgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgagacgagcggcgtgatcaccccggaagaggcgatccgtcaatcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcgctggaaggcacggaaacggctgccgaagcaccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgcccggtggacgatctcgagctgacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctgaacgagatc
aaggaagtgctggcttcgcgcggcctcacgctgggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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