Burkholderia vietnamiensis G4: Bcep1808_0452
Help
Entry
Bcep1808_0452 CDS
T00493
Name
(GenBank) YD repeat protein
Organism
bvi
Burkholderia vietnamiensis G4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Colicin-DNase
WHH
Motif
Other DBs
NCBI-ProteinID:
ABO53464
UniProt:
A4JB11
LinkDB
All DBs
Position
1:484436..489088
Genome browser
AA seq
1550 aa
AA seq
DB search
MAQQLPPGAEKEEAVTWLSDVSAKDVAAVGNRFDAWLRRISGNHITFEDVKTFAGAVPIV
GNIMAMVDALGDIAEIVEKRGGQVLDYMSLAINLLGIIPIPPTLAPFRMSARPLLALVRH
ELLATRSNLGAAIISVLVTHVNATCATEIEDFLNKLKAGLVELLDGCASKSEELMLALAT
GMDRALHGQLLDANANLKRQQQLATKMADDRPWYSPSRVGDGIQFAYEGTKALGKQVVNK
TAGTMAKLAPDAWLEPFRGAVTFLRTEAPKIATSIRSLAGSEEGKMMWLVLQLIEAVGRV
KARAKLHEQTADVKAAGTSQAKKTRGQEGLEKTSGQAPAEGPGKSACKACGIGASPASID
FAFGDETFSHVDFDLPGALPLVWERTYRSRLSAYDDGELGARWITPYTTRIDIADGQWIY
RDAEGRSIEYPALAAGAVHDDLSENLTLSRLDDTWVTIAYGHDALHAYERRGDAFRLAMQ
KDRAGNTITLDYDALDRLARLIDASGNVLAFEHDRHGRIVRIEHVLKDGARRTLASYEYD
TAGDLVRAVDRHGNARTYRYHRHLVTRYTDRTGRGMTLEWDGADADDNANAKCIREYADD
GSLDLRLAWNPNIRLTYVTDALGHMTRYYFNIHGYVYRIVYPDGNQEWFRRDAHHNLVLH
IRQDGSIERREYDARGNLVEHERADGSVVEMAYDDKDQMIRLVDPNGHVWQRKYDDAGNL
VEEIDPLERSTKYAYNDKGLPTQITDAKGGSKALEYNDAGQVTSYTDCSGKKTEWRYDDI
GRVIETKDASGGVIAYAYGASGQLSEIRSPAGVEHVQYDAEGRLLAHTDQLNRSTRYGYD
AVGRIASRADALGQTIAYRYDRLGRLTALTDANFATYQFHYDPAGRLIEEVAFDGKSTRY
QYDPDSGSLVSMDEAGCVTSVDVDVNGRLLKRVAGGSEERFAYDRSGRLIDAVNRYSRVQ
FFFDPVGNLVREHHAYDLFGEQRSYVWHHDYDELGNRRRSVRPDGHVVDWLMYGSGHVHG
MLLDGEERVQFERDDLHRETVRVLSSKVGQRTHYDPAGRVLQQTIQRSTAPAPLVERRYR
YDAVGQLSRIEDSRKGGTDYRYDPVGRLVEAISPVAKERFAFDPASNIIDPVRTAETPAS
RPSPVRPESTLPVEVPKVLGNLLKAYAGMHFEYDARGNLVRKRTPVGEQQYEWDEFNRLL
SARVAETSRQSEARYFYDAFGRRIAKEVNGERTVFGWDGDTLAYESDGERGTHYLYEPRT
FVPLAQYVAEPVEGIATPQWKSTDRYVPEEDPLQKMPERRGDAAVFYYHCDQIGTPQLLT
DDDGDVVWEASYKAWGEAREVIARASKATGIVAKNALRFQGQWGDDETGLHYNRYRYYDP
HSGRFVSKDPIGLQGGPNIYQYAPNPILWTDALGLARELSGCDSSNRPLSSSQYSVLHEV
QLAPGQEVGSDPSHFREANRQFDAAMQSDPQFKQMMDQHYSGVSDHVAAGPRGGYKSSAP
PGFSWHHHPCRKGVLQLVPMSQHQAPGPVQAVLHPGGQGGKQNWGGGRAR
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaacttccacccggcgccgagaaggaagaagccgtcacctggctcagtgac
gtttcggcgaaggacgtcgcggcggtcggcaaccgcttcgatgcatggctgcgccgcatc
agcggcaatcacatcacgttcgaagacgtgaagacgtttgccggcgcggtgccgatcgtc
ggcaacatcatggcgatggtcgatgcgctcggcgacatcgccgagatcgtcgagaagcgc
ggcgggcaggtgctcgactacatgagcctcgcgatcaacctgctcggcatcatcccgatt
ccgccgacgctcgcgccgttccggatgtcggcgcgcccgttgctcgcgctcgtgcgtcac
gagttgctggccacgcgcagcaatctcggcgcggcgatcatctccgtgctggtcacgcac
gtcaacgcgacgtgcgcgaccgagatcgaggatttcctcaacaagctgaaggcgggcctc
gtcgaactgctggacggctgcgcatcgaaatccgaggagctcatgctcgcgctggcgacg
ggcatggaccgcgcgctgcacgggcaactgctcgacgccaacgcgaacctgaagcgccag
cagcagctcgccaccaagatggccgacgaccggccgtggtacagcccgagccgggtcggc
gatggcatccagttcgcatacgaaggcaccaaggcgctcggcaagcaggtcgtcaacaag
acggccgggacgatggcgaagctcgcgcccgacgcgtggctcgagccgtttcgcggcgcg
gtgacgttcctgcggaccgaggcgccgaagatcgcgacgtcgatccgttcgcttgccggc
agcgaagaaggcaagatgatgtggctggtgttgcagctgatcgaggccgtcgggcgcgtc
aaggcacgcgcgaagctccatgagcagacggccgacgtcaaggctgccgggacgagccag
gcaaagaagacgcgcgggcaggaaggtctcgagaagaccagcggccaagcgccggccgaa
ggtccgggcaagagcgcgtgcaaggcgtgcggcatcggcgcgtcgccggcttcgatcgat
ttcgcgttcggcgacgaaaccttctcgcacgtggatttcgatctgccgggcgcgctgccg
ctcgtgtgggagcgtacgtaccgttcgcggctttccgcgtatgacgacggcgagctcggt
gcgcgatggatcacgccctatacgacgcggatcgacatcgcggacggtcagtggatctat
cgcgatgcggaaggacgcagcatcgagtatccggcgctggcggccggcgcagtgcacgac
gatctgtcggaaaacctgacgctgtcgcgactcgacgacacctgggtgacgatcgcctat
ggccatgacgcgctgcatgcgtacgagcgtcgtggcgacgcgttccggctggcgatgcag
aaagatcgcgccggcaacacgatcacgctcgactacgacgcgctcgaccgccttgcgcgg
ctgatcgacgcgagcggcaacgtgctcgcattcgagcacgaccgacatggccggatcgta
cggatcgagcatgtgctgaaggacggtgcacgccggacgctggcgagctacgagtacgac
accgcgggcgacctcgtgcgcgcggtcgatcgtcatggcaatgcgcggacgtatcggtat
caccgtcacctcgtgacgcgctacaccgaccgcaccggccgcgggatgacgctcgaatgg
gatggcgcggatgccgacgacaacgcgaacgcgaaatgcatccgcgaatatgccgatgac
ggcagcctcgatctgcgtctcgcgtggaacccgaatatccgcctcacctacgtgaccgac
gcgctcggtcatatgacgcgctactacttcaacatccatggctacgtgtaccggatcgtc
tatccggacggcaaccaggagtggttccggcgtgacgcgcatcacaatctggtgctgcat
atccgtcaggacggcagcatcgagcggcgcgagtatgacgcgcgcggcaatcttgtcgag
cacgaacgcgcggacggcagcgtcgtcgaaatggcctacgacgacaaggaccagatgatc
cggctcgtcgatccgaacgggcacgtgtggcaacgcaagtacgacgatgcgggcaatctc
gtcgaagagatcgatccgctcgagcgctcgacgaagtacgcgtacaacgacaaggggttg
ccgacgcagatcaccgatgcgaagggcggctcgaaggcgctcgagtacaacgatgccggg
caggtcacgagctacacggattgctccggcaagaagacggagtggcggtacgacgatatc
ggccgcgtgatcgagacgaaggacgcatccggcggcgtgatcgcttatgcatacggcgcg
agcggccaattgagcgagattcgctcaccggccggtgtcgagcacgtgcagtacgacgcc
gaaggccgattgctcgcgcataccgatcagctcaatcggtcgacgcgctatggctacgac
gcggtgggccgcatcgcgagccgcgcggatgcgctcgggcagacgatcgcttaccgctac
gaccgcctgggacgtttgacggcgctcaccgatgcgaactttgcgacgtaccagttccac
tacgatccggcggggaggttgatcgaggaagtcgcgttcgacggcaagtcgacgcgctat
caatacgatccggacagcggcagcctcgtatcgatggacgaagcgggctgcgtgacgtcc
gtcgacgtcgatgtgaacggccgtctgctgaagcgcgtcgcggggggcagcgaagagcgg
tttgcgtatgaccgcagcggccggttgatcgacgcggtgaatcgatacagccgcgtgcag
ttcttcttcgatccggtcggcaatctggtgcgcgagcatcatgcatacgacctgttcggc
gaacagcgcagctacgtgtggcatcacgactacgacgaactcggcaaccggcgtcggagc
gtgcggccggacgggcatgtcgtggactggctgatgtacggctcggggcatgtgcacggg
atgttgctcgatggcgaggagcgcgtgcagttcgagcgcgacgatctgcatcgcgagacg
gtgcgcgtgctgtcgagcaaggtggggcagcgcacgcactacgatccggcggggcgcgtg
ctgcagcagacgattcaacggtcgacggcgcccgcgccactggtcgagcggcggtatcgc
tatgacgcggtgggacaactgtcgcgaatcgaggacagccgcaagggcgggaccgactat
cggtacgatccggtcggacggttggtcgaggcgatcagtccggtggcgaaggagcgcttc
gcgttcgatccggcgagcaacatcatcgatccggtgcggactgccgagacgccggcatcg
cgtccgagcccggtgcggccggaaagcacgttgccggtcgaggtgccgaaggtgctgggc
aacctgctgaaggcgtatgcggggatgcacttcgagtacgacgcgcgcgggaatttggtg
cgcaagcggacgccggtgggcgagcagcaatacgagtgggatgagttcaatcgcttgctg
tccgcgcgtgttgcggagacgtctcggcagagcgaggcgcggtatttctatgacgcgttc
ggccggcgtattgcgaaggaggtgaacggcgagcggacggtgttcggttgggatggtgac
acgctggcgtacgagagcgacggcgagcgcggtacgcactatctgtacgagccgcggacg
ttcgtgccgctggcgcagtatgttgcggagccggtggagggcattgcgacgccgcagtgg
aagagcaccgatcgctatgtgccggaggaggatccgctacagaaaatgccggagcggcgg
ggcgacgcggcagtgttttactaccactgcgaccagatcgggacgccgcagttgctgacc
gatgacgacggtgacgttgtgtgggaagcgtcgtacaaggcgtggggtgaagcgcgggag
gtgatcgcgcgcgcgtcgaaggcgacggggatcgtggcgaagaatgcgctgcggtttcag
gggcagtggggggatgatgagacggggctgcattacaaccggtatcggtactatgatcct
cattctggccggttcgttagcaaagatccgattggtttgcaaggcggcccgaacatctat
cagtacgcgcccaacccgatcttgtggacagatgcactcggtctagcgcgtgagctgtct
ggatgcgatagttcaaaccgccctttaagcagtagccaatattcagtgcttcatgaggtt
cagcttgctcctggtcaggaggtgggtagcgacccatcgcatttcagggaagcaaatcga
cagttcgatgcagcaatgcaaagcgatccacagttcaagcaaatgatggatcaacattat
tccggggtttcggatcacgttgcggctggcccacgaggcggatacaaatcaagtgccccg
cccgggttctcgtggcatcatcatccgtgccgtaagggggttctgcagttggtcccgatg
tctcagcatcaggcgcctggccctgttcaagctgtgctgcatccgggcggccaaggtggc
aaacaaaattggggaggcggacgcgctcgctaa
DBGET
integrated database retrieval system
