Entry |
|
Name |
(GenBank) Uracil-DNA glycosylase
|
KO |
|
Organism |
bvi Burkholderia vietnamiensis G4
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bvi00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcep1808_0506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:bvi03400]
Bcep1808_0506
Enzymes [BR:bvi01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bcep1808_0506
DNA repair and recombination proteins [BR:bvi03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcep1808_0506
Prokaryotic type
Bcep1808_0506
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(549469..550368)
|
AA seq |
299 aa
MATRKTLRTPQQASLFDDPAPEPAQHDVPAAAPARARAAGKKAAEAAPARAAQPQAGAAD
VPHLAAQFDALPAVWRDVLKPFTDSDAYAPLCRFVDDERAAGKTVYPTDVFRALRLTSPD
DVKVVILGQDPYHGDDRGTPQAHGLAFSVPPAVRTPPSLRNIFKEIAANFGHDTPRHGCL
DTWARQGVLLLNTVLTVERGAAASHAKRGWEQCTDTLIRELAGRHRGLVFMLWGAHAQAK
RALFDANAHCVLEAPHPSPLSAHRGFLGCRHFALANEYLVEAGREPIDWRLPEIAETLA |
NT seq |
900 nt +upstreamnt +downstreamnt
atggcaacccgcaagactctccgtacgccgcaacaggcgtcgctgttcgacgatcccgcg
ccggaaccggcgcagcacgatgttcccgccgccgcacccgcgcgtgcgcgcgcggccggc
aagaaggccgcggaagcggctccggcgcgcgccgcgcagccgcaggccggcgccgccgac
gtcccgcacctcgccgcccaattcgacgcgctgccggccgtctggcgcgacgtgctgaag
ccgttcaccgacagcgacgcgtacgcgccgctgtgtcgcttcgtcgacgacgagcgcgcc
gccggcaagacggtctatccgaccgacgtgttccgcgcgctgcgcctgacgagcccggac
gacgtgaaggtcgtgattctcggccaggacccgtaccacggcgacgaccgcggcacgccg
caggcccatggcctcgcgttctcggtgccgccggccgtgcgcacgccgccgtcgctgcgc
aacatcttcaaggaaatcgcagcgaacttcggtcacgacacgccgcgccacggctgcctc
gacacgtgggcgcgccagggcgtgctgctgctcaacaccgtgctgacggtcgagcgcggc
gccgccgcgagccacgcgaagcgcggctgggagcaatgcacggacacgctgatccgcgag
ctggccggccgtcatcgcggcctcgtgttcatgctgtggggcgcacacgcgcaggcgaag
cgcgcgctgttcgatgcgaacgcccattgcgtgctcgaggcgccgcatccgtcgccgctg
tccgcgcaccgcggcttcctcggctgccgtcacttcgcgctcgcgaacgagtatctggtc
gaagcgggccgcgaaccgatcgactggcggctgccggagatcgccgaaacgctcgcctga |