Burkholderia vietnamiensis G4: Bcep1808_1734
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Entry
Bcep1808_1734 CDS
T00493
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi02024
Quorum sensing
bvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcep1808_1734
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bcep1808_1734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvi03019
]
Bcep1808_1734
03036 Chromosome and associated proteins [BR:
bvi03036
]
Bcep1808_1734
Messenger RNA biogenesis [BR:
bvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Bcep1808_1734
Chromosome and associated proteins [BR:
bvi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Bcep1808_1734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABO54738
UniProt:
A4JEN5
LinkDB
All DBs
Position
1:complement(1887846..1888085)
Genome browser
AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaagagcac
gttcctgtttcgatctatctcgtcaacgggatcaagctccaagggaacatcgaatccttc
gaccagtacgtcgtgttgctccgtaacaccgtgacccagatggtctacaagcacgccatt
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcttcgtcctaa
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