Burkholderia vietnamiensis G4: Bcep1808_2402
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Entry
Bcep1808_2402 CDS
T00493
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03030
DNA replication
bvi03430
Mismatch repair
bvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcep1808_2402
03430 Mismatch repair
Bcep1808_2402
03440 Homologous recombination
Bcep1808_2402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvi03032
]
Bcep1808_2402
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_2402
Enzymes [BR:
bvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcep1808_2402
DNA replication proteins [BR:
bvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcep1808_2402
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcep1808_2402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
ABO55401
UniProt:
A4JGJ8
LinkDB
All DBs
Position
1:complement(2661653..2665186)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWITNPDDRDKPSRLLLLVKDKTGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAQRWAEVFPGGFYIELQRYGQPGAE
AYIQQAATLAASLQLPVVATHPMQFMTEDDFTAHEARVCISEGDMLANPRRQKRFTTAQY
FRTQDDMVALFADIPSAVANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLEKRLEQLYPDVAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDAG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPTKADWSLAQVPLDDPASFQ
LLKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVTNNLVVLPPDINQSHYRFEPVAQADGTRSRTIRYGLGAVK
GSGQNAIEEILRAREEKPFADLFDFCERVDRRIVNRRTVEALIRAGAFDSLNPNRAQMLA
SVPLAMEAAEQAAANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALLKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMN
GNADAAVLRRVLEPHVSKDEPGVANVVDAPAPRGGGRDGGRRPQAPLPNGLAVQIHYSNA
RAQGEMRLGDAWRVKPSDALLAELRATFGGSVVEITY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatctccgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgacatcgtcaaggccgctgccgccgacggtcagggtgcgctcgcc
ctcaccgatctcggcaacgcgttcggcctcgtccgtttctaccaggaagcccgtggcaag
ggcatcaagccgattgccggctgcgacgtctggatcacgaatccggacgatcgcgacaaa
ccgtcgcgcctgctgctgctggtgaaggacaagaccggttatctgaatctgtgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgggcggagctcgacgcgagctgg
ctcgacggcgagttgtcgcaagggctgctcgcgctgtcgggcgcgcagcaaggcgatatc
gggctcgcgctggcggccggtaacgaggaagccgcgcgccgtcacgcgcagcgctgggcc
gaggtgtttcccggcggcttctacatcgagttgcagcgttacggccagccgggcgccgag
gcctacatccagcaggccgcgacgctcgccgcgtcgctgcagctgccggtcgtcgcgacg
catccgatgcagttcatgaccgaggacgatttcaccgcgcacgaagcgcgcgtgtgtatc
tccgaaggcgacatgctcgcgaatccgcggcgccagaagcgcttcacgaccgctcagtac
ttccgcacgcaggacgacatggtcgcgctgttcgcggatattccgtcggcggttgcgaat
acggtggaaatcgcgaagcgctgcaacctgaagctcgaactcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgattacctggtccagctgtcgaaggag
gggctcgagaagcgcctcgagcagctgtacccggatgtcgccgagcgcgatgcgcagcgc
gacacctactacaagcggctcgaattcgagtgcgggaccatcacgaagatgggcttcccc
ggctacttcctgatcgtggccgacttcatcaactgggcgaagaacaacggcgtgccggtc
ggcccgggccgcggctcgggcgccggctcgctggtcgcgtacgcgctcggcatcaccgat
ctggatccgctgcgctacaacctgctgttcgagcgattcctgaatccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgtcagcacggccgcgatcgcgtgatccagtacgtg
aaggagaaatacggcgcggacgccgtgtcgcagatcgccacgttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgatctcggctacatgttcaccgacggc
gttgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgcaactgcaggagcgctacgacaacgaggacgaggtgcatcagctgctcgat
ctcgcgcagcgcgtcgagggcctcacgcgtaacgtcggcatgcacgcgggcggcgtgctg
atcgcgccgggcaagctgaccgatttctgtccgttgtacacgcagggcgacgacgccggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggcctcacgacgctgacgatcctcgactgggccgagcgctacatccgtcgcctcgac
ccgaccaaggccgactggtcgctcgcgcaggtgccgctcgacgatccggcgtcgttccag
ctcctcaagaaggccaacacggtcgcggtgttccagctggaaagccgcggcatgcagggc
atgctgaaggacgcgcagcccgaccgcttcgaagacatcatcgcgctcgtgtcgttgtac
cgtccggggccgatggacctgatcccgagcttctgcgcccgcaagcacgggcgcgagaag
gtcgactatccggatccgcgcgtcgaacccgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgaaggtgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcttattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcgtc
acgaacaacctcgtggtgctgccgcccgacatcaaccagtcgcattaccgcttcgagccg
gttgcgcaggccgacggcacgcgttcgcgcacgatccgctacggcctcggcgcggtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcgcgcgaggagaagccgtttgcc
gatctgttcgacttctgcgagcgggtcgaccggcgcatcgtcaaccgtcgcacggtcgag
gcgctgatccgcgcgggcgcgttcgattcgctgaacccgaaccgcgcgcagatgctcgcg
tcggttccgcttgcaatggaggcggccgaacaggccgctgcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcacgcgcacgcgctcgtcgacgaaccggcgtgg
gacgacaagcgccggctgcaggaagagaagggcgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaagtgcgccggttcgtgcggcagaaggtgggtgatttg
aaggaaggccgcgacaagctcgtcgcgggcatcatcgcgtcgctgcgcacgcagatgacg
cagcgcggcaagatgctgatcgcgttgctcgacgatgggtcggggcagtgcgaaatcacg
atcttcaacgagcagttcgaggcgaacaaggcgctgctcaaggaagacgagctgctgatc
gtgcaggggcaggcgcgtaacgacgcgttcaccggcggcatccgcttcacggccgacacg
gtgatggatctcgaacgcgcgcgcagccgctatgcgcaggcggtgcggctgacgatgaac
ggcaacgccgatgcggcggtgctgcgccgcgtgctcgagccgcacgtgtcgaaggatgaa
ccgggcgtcgccaacgtggtcgacgcccccgcgccgcgcggcggcgggcgcgacggcggc
cgtcgcccgcaggcgccgctgccgaacgggctcgcggtgcagattcactacagcaacgcg
cgcgcgcagggcgaaatgcgtctgggcgatgcgtggcgcgtgaagccgagcgacgcgttg
ctcgcggagctgcgcgcgacgttcggcggcagcgtcgtcgaaatcacgtactga
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integrated database retrieval system
