Burkholderia vietnamiensis G4: Bcep1808_3948
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Entry
Bcep1808_3948 CDS
T00493
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi00260
Glycine, serine and threonine metabolism
bvi00460
Cyanoamino acid metabolism
bvi00630
Glyoxylate and dicarboxylate metabolism
bvi00670
One carbon pool by folate
bvi00680
Methane metabolism
bvi01100
Metabolic pathways
bvi01110
Biosynthesis of secondary metabolites
bvi01120
Microbial metabolism in diverse environments
bvi01200
Carbon metabolism
bvi01230
Biosynthesis of amino acids
bvi01240
Biosynthesis of cofactors
bvi04981
Folate transport and metabolism
Module
bvi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bcep1808_3948
09102 Energy metabolism
00680 Methane metabolism
Bcep1808_3948
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bcep1808_3948
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bcep1808_3948
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bcep1808_3948
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bcep1808_3948
Enzymes [BR:
bvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bcep1808_3948
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABO56929
UniProt:
A4JKX6
LinkDB
All DBs
Position
2:719976..721223
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AA seq
415 aa
AA seq
DB search
MFNRTTSTVANVDPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLAQEHKPKLIVAGASAFAL
KIDFARMAQIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPAEAEQVGNLIADVLENPEDAATLERVRAQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgcactaccagcaccgtcgcgaacgtcgatcccgagatctttgctgcgatc
gagcaggaaaaccgccgccaggaagaccacatcgagttgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcacagggctcgcagctcacgaacaagtacgcggaaggttat
ccgggcaagcgctactacggcggctgcgagtacgtcgacgtggtcgagcagctggcgatc
gatcgcgtgaagcagctgttcggcgcggaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatggggatg
agcctggcgcacggtgggcacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacgggctgaacgaaaacgaagacatcgattacgacgcggcggaa
aagctcgcgcaggagcacaagccgaagctgatcgtcgcgggcgcctcggcgttcgcgctg
aagatcgacttcgcgcgtatggcgcagatcgcgaagtcggtcggcgcgtacctgatggtg
gacatggcgcactacgctgggctgatcgcggcgggcgtgtatccgaacccggtgccgcac
gctgatttcgtgacgacgaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggcggagtacgagaagcagatcaactcggcgatcttcccgggcatccagggc
ggcccgctgatgcacgtgatcgcggcgaaggcggtggcgttcaaggaagcgctgtcgccg
gagttcaaggcgtatcagcaaaaggtggtggagaacgcgcgggtgctggccgagacgctg
gtgaaacgcgggctgcggatcgtgtcgggccgcacggaaagccacgtgatgctggtggac
ctgcgcgcgaagcacatcacgggcaaggcggcggaagcggcgctgggtgcggcgcacatc
acggtgaacaagaacgcgattccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cggctgggctcgccggcgatgacgacgcgcggcttcggtccggcggaagcggagcaggtg
ggcaacctgatcgcggacgtgctggagaacccggaagatgcggcgacgctcgagcgcgtg
cgcgcgcaagtggccgagctgaccaagcgtttcccggtctacgggtga
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