Burkholderia vietnamiensis G4: Bcep1808_4248
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Entry
Bcep1808_4248 CDS
T00493
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03030
DNA replication
bvi03410
Base excision repair
bvi03420
Nucleotide excision repair
bvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcep1808_4248
03410 Base excision repair
Bcep1808_4248
03420 Nucleotide excision repair
Bcep1808_4248
03440 Homologous recombination
Bcep1808_4248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvi03032
]
Bcep1808_4248
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_4248
Enzymes [BR:
bvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcep1808_4248
DNA replication proteins [BR:
bvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bcep1808_4248
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bcep1808_4248
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcep1808_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
ABO57228
UniProt:
A4JLS5
LinkDB
All DBs
Position
2:1057012..1059765
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAEQRGMNVIVSTGDKDLAQLVTERVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRKLVTVDTACDLAPHLESIEASLKTDGEARDLLRDIFARYGFKTWLREVDSAPPEGGG
ADARDGEPAPAVATDIVREYETIQTWAQFDAWFAKIDAAALTAFDTETTSLDPMTARLVG
LSFSVEPGKAAYLPVAHRGPDLPEQLPLDDVLARLKPWLEAADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
DQAAAYAAEDADITLQLHHVLYPQIAREAGLERVYREIEMPVSLVLRKMERTGVLIDDAL
LHAQSNEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NEPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFAHGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRAAAKDQGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatctgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgccttgcaggtcgagccgattcacggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaggccgagcagcgcgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcacagctcgtgaccgagcgcgtcacgctcgtcaacacgatgacgaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcgcatcatc
gattacctcgcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgtcgcaatacgacagcctcgacggcgtgatcgagcac
gcaggcgagatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcaagctcgtgaccgtcgataccgcctgcgatctcgcaccgcatctcgaatcg
atcgaggcgtcgctgaagaccgacggcgaagcacgcgacctgctgcgcgacatcttcgcg
cgttacggcttcaagacatggctgcgcgaggtcgacagcgcaccgccggaaggcggcggc
gccgacgcgcgcgacggcgagccggcgccggcggtcgcaaccgacatcgtgcgcgagtac
gagacgatccagacctgggcgcagttcgacgcgtggttcgcgaagatcgacgcagccgcg
ctgacggcgttcgacaccgaaaccacgtcgctcgatccgatgacggcacggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggccgcgtatctgccggtcgcgcatcgcgggccc
gatctgcccgagcaactgccgctcgacgacgtgctcgcgcgcctgaagccgtggctcgaa
gcggccgaccgcaagaaggtcggccagcatctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgagtcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgccatctgggcgtcaagacgatc
aagtatgaagacgtcgcaggcaagggcgcgaagcagatcggcttcgacgaggtggcgctc
gaccaggccgccgcgtacgcggccgaagacgccgacatcacgctgcagctgcatcacgtg
ctctatccgcagatcgcacgcgaagcgggcctcgagcgcgtgtatcgcgagatcgagatg
ccggtgtcgctggtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgcgctg
ttgcacgcgcaaagcaacgagatcgcgacgcggctcatcgagctcgaagggcaggcgtac
gagctggccggcggcgaattcaatctcggctcgccgaagcagatcggccagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtccaccgacgaa
gaagtgctgcagaagctcgccgaggattacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaaccccgcc
acaggccgcgtacacacgaactatgcgcaggccgtggcggtcaccggccggctcgcgtcg
aacgagccgaacctgcagaacatccccgtgcgcacggccgaaggccggcgcattcgcgaa
gcgttcatcgcgtcgccgggccatcggatcgtgtcggccgactattcgcagatcgaattg
cggatcatggcgcacatctccggcgatgcgtcgttgctgcgcgcgttcgcgcacggcgag
gacatccaccgcgcgaccgcggccgaagtgttcggcgtgacgccgctcgaggtgaattcg
gatcagcgccgcatcgcgaaggtgatcaacttcgggttgatctacgggatgagcgcgttc
ggactcgcatcgaatctcggcatcacgcgcgatgcggcgaagctgtacatcgaccgctat
ttcgcgcgctacccgggggtcgcgcagtacatggaagacacccgtgcggcggcgaaggac
cagggctatgtcgaaacggtgttcggccgtcgcctgtggctgccggaaatcaacggcggc
aacgggccgcgccggcaggcggccgagcgtgccgcaatcaatgcaccgatgcagggcacg
gcagccgatctgatcaagctgtcgatgatcgcggtcgacgactggctcacgcgcgaccgg
cttgcatcgcgcatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgacgac
gagctgtcgctggtgcgcgagaagctgcccgaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgcggaagtcggcgccggcgcgaactgggaagaggcccactga
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