Burkholderia vietnamiensis G4: Bcep1808_4371
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Entry
Bcep1808_4371 CDS
T00493
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
bvi
Burkholderia vietnamiensis G4
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_4371
Enzymes [BR:
bvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcep1808_4371
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Bcep1808_4371
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Peptidase_C14
Helicase_C
Helicase_dom4_arc
Pept_C14_Metacaspase
DEXQc_Suv3
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABO57338
UniProt:
A4JM35
LinkDB
All DBs
Position
2:1188937..1191945
Genome browser
AA seq
1002 aa
AA seq
DB search
MKGIFVGINKQLDPNIDELTGAVRDATALNALFLDSIPGFSARLLVDEAATKDNVSEAIF
GTLANAADDDVVVISFAGHGSPDGGIAVYDTLCTDLAGTTLSMAAIGDAFKATRARAVLC
ILDCCFSGHAPARVLDVPAQPRSVFALEGVAGEGRILLAACTARQVAWEQPGTGHGLLTY
AVIQAMTATSAEQISFPGVGDEIVQIARVEAERIGATQTPVFLGNVQGGLVFPRLVLGAN
YHAAFPSTTVEQMAGPFEQLLDNGFPQSIVDHWVERFPGGLNSLQLRAVNEFGVLTGRSL
MTVAPTSSGKTMIGELAAIQSVITGKKAIFLLPYRAIVSEKFEEFSERYGPSGLRIVRCM
GDATDTIGDVLAGRYDLGFFTYEMFLNLALGAPHILNRIGLVTVDEAQFIIDPRRGITVE
LILALLLRARTRGIHPQLIVLSAVIGSLNGFDQWLDIPVLLSRDRPVPLIEGVLDRNGVF
QYRDVDGMTKTDALLSPHSIRVRKTKPSSQDVIVPLAQKLVGAGEKLIVFRNQRGKAQGC
ARYLSGELGKGAATATLHALPSQDLTSASHDLRECLRGGTAFHSTNLLRAEREAIERGFR
DTEGGIWVLGSTTTLAAGINTPASTVILAEQEFRGEDGRPFSIAEYKNMAGRAGRLGFNE
IGKAIILAETPVERARLFQRYVEGTPEDVVSSFAESAMPTWVLRLLSQVRGVKLVEIPGL
LVNTFGGYAAARANPNWVAVVQPRVAAFVDRLLQAGLAEKEGDDIVHLTMLGQAVGSSSL
SFESGLRLVELLRSVDIATTPPLHILAHVQVLQEMSDVYTPLMTRGRAESARVNDVIVRF
GPAMSRLLQRYGADEHTFWRRCKRAAILFDWVEGVPVDSLERSYTANPFTAIRYGDIVSI
ADATRFHLRSAQRILSALFPKHQQFLDAVDILLTRLEFGVPERALPLSKLCVPLNRGQCL
ALLQEGVQTAEAVSAMSDAQLLACVGQSTFQRLRPQSEVGGA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
ttgaagggaattttcgtcggcatcaacaagcagctcgatccgaacatagatgagctcaca
ggagcggtccgcgatgcaactgctcttaatgcgctgtttctcgattcgattccgggcttt
agcgccagactactcgtagacgaggccgcgaccaaggataacgtctctgaggcgatcttc
ggcacactggctaatgctgctgacgatgatgtcgttgtcatcagctttgctggtcacggt
tcaccggatgggggcatcgctgtctacgataccctttgcacagacctcgccgggaccaca
ttgtccatggcagcgattggagacgcattcaaggcgacccgagcccgtgccgttctgtgc
atcctggactgctgctttagcggccacgctccggctcgagtcctggacgttcccgcgcag
ccgagaagcgtattcgcacttgaaggtgtcgccggcgaagggcggatcctgctggcggcg
tgtactgcgcggcaagtagcgtgggagcaacccggtactggacacggcctgctcacatac
gctgtcatacaggcaatgacggcaacttcggcggagcagatcagctttccaggtgtcgga
gatgaaatcgttcagattgcccgcgtcgaagcggagcgcataggcgcaacgcaaacgcct
gtattcctgggaaacgtccaaggaggactggttttcccgcggctcgtcctgggcgctaac
taccacgctgcgttcccgtcaaccaccgtcgagcagatggccggtccgttcgagcagctg
ctggacaatggtttcccgcaatcaatcgtcgatcattgggtcgagcgcttcccgggcggt
ctcaactccttgcaactacgtgcggtcaacgagttcggcgtgcttacgggtcgttcactt
atgaccgtcgcaccaacgagctcgggcaagacgatgatcggagagcttgcggctatccag
tcggtcatcactggaaagaaggcgattttcctgctgccataccgcgccatcgtcagcgag
aagttcgaggagttctcggagcgttatggtccgtcggggctgcgcatagttcgctgcatg
ggggatgccacagacaccattggagacgtgcttgctggtcgctatgatctcgggttcttc
acgtacgagatgtttctcaacctcgcgcttggagcgccacatatcctcaaccggattggc
cttgtaactgttgacgaagcgcaattcatcatcgatccgcgcagaggtattaccgtcgag
ctgattcttgcgttgctgcttcgggctcgaacacgaggcatccacccgcaattgattgtg
ctgtctgccgtaatcggcagcctgaacgggtttgaccaatggctcgacatcccagtcctc
ctctcgcgcgaccgcccggtgccactgattgaaggggtgctcgaccggaacggagtcttt
cagtatcgcgacgttgacggtatgaccaagaccgatgcgctattgtcgccgcacagcatt
cgcgtacgaaagaccaagcctagttctcaggatgtcatcgttccactggcacagaagctc
gtcggggctggcgagaaactgattgttttccgcaatcagcgtggcaaagcccaaggatgc
gctcgttatctctccggcgagctcggtaagggggcggcgaccgcaacgctccatgccctt
ccttcgcaggatctgacctctgcctcacatgatttgcgtgaatgcctgcgcggtggtact
gcgttccacagcactaacttgctgcgagccgagcgtgaagcgattgagcgcggttttcgg
gacacggaaggcggcatctgggttcttggatcaacgacgacgctggcggccgggattaac
acgccagcgtctaccgtaattcttgccgagcaggaattccgtggcgaagatggacgtcct
ttctcgattgcggagtacaagaacatggccggtcgggccggccgtctgggtttcaacgaa
atcgggaaggccatcatacttgcggaaacccctgtggaaagggccaggctgttccagcga
tacgtcgaaggaacacccgaagacgtcgtttcttcgtttgccgaatcggcaatgccgacc
tgggtacttcgtcttctgagccaggttcgtggcgttaaactagtcgagataccgggtctg
cttgtgaacacctttggcggttacgctgccgcccgtgccaaccctaactgggtagcagtg
gttcagccgcgtgtagccgccttcgtggatcgtctgctgcaggcgggactcgccgaaaaa
gagggtgacgacattgtccacctgactatgctcgggcaggcagtgggcagttcgtctctt
tcttttgagtctgggctgcgtttggtggaactgttgcgtagtgtcgacattgcaacaacg
cctccgcttcatatcttggcgcacgtgcaggttttgcaggagatgtccgacgtttatacg
ccgctgatgacgcgtggtcgggccgaatcggctcgcgtcaatgatgttatcgtccgcttc
ggtccagcaatgtccaggctgctccagcgttacggtgccgacgaacacaccttctggcgc
cgctgcaagcgtgctgcaattctcttcgattgggtcgaaggcgttcccgtcgacagtttg
gagcggtcctacacggcaaatcccttcacggcgattcgatacggcgacattgtgagcatc
gccgatgccacgcggtttcacttgcggtctgctcagcgcatactctcggcattgtttcct
aagcatcagcaatttctcgatgcagtcgacatattgctcacgcgactggaattcggagtc
ccggagcgcgccttgccgttgagcaagctgtgcgttccattgaaccgcggacagtgtctt
gcgctgctgcaggaaggggtgcaaacggcggaggctgtatcggctatgagcgacgcgcaa
cttcttgcctgcgttggtcaatctacgttccaacgcctgcgtccacagtctgaagtcggg
ggcgcctga
DBGET
integrated database retrieval system
