Burkholderia vietnamiensis G4: Bcep1808_4917
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Entry
Bcep1808_4917 CDS
T00493
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Bcep1808_4917
09124 Replication and repair
03420 Nucleotide excision repair
Bcep1808_4917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvi03021
]
Bcep1808_4917
03036 Chromosome and associated proteins [BR:
bvi03036
]
Bcep1808_4917
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_4917
Enzymes [BR:
bvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Bcep1808_4917
Transcription machinery [BR:
bvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Bcep1808_4917
Chromosome and associated proteins [BR:
bvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Bcep1808_4917
DNA repair and recombination proteins [BR:
bvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Bcep1808_4917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABO57874
UniProt:
A4JNM1
LinkDB
All DBs
Position
2:1792007..1794325
Genome browser
AA seq
772 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSARGARYETEIALAGTWGT
LTVRGRADGYDPLANRLEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCATRGLAEINV
ALVYFDIVSERETVLTETLSAEALAAFFAEQCACFVGWAEREAAHRAARDEALRALTFPH
GQFRSGQRELAVSVYRAARDEGCLIAQAPTGIGKTLGTVFPMLKACGEGKLDHVFFLTAK
TPGRALALDAARTLGAGTPALPLRVLELVARDKACEHPDRACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRETVRAAALAHDVCPYYLAQELARWSDMAIGDYNYYYDGSAMLHALAQQ
NQWRVGVLVDEAHNLLDRARRMYSASLDPFAFAAAREAAPPTLRKAFDRLARAWGALNRA
QAERYAAYPAIPAGLVSAVQNLVATIGEHLTDAPRANDDALLRFHFDAIQFGVLADAFDS
ASIFDATLHGEPLPRQAALETVDAVDTLVPAARRRRIQSTLCVRNVIPAGFLAPRYEAAR
ATVLFSGTLSPFRFYRDTLGLPADTGWLDVEGPFRAEQLTVRVASHVSTRWRDRDRSLEP
IVDLIAAQYATRPGNYLGFLSSFDYLARVVALMQARHPDVPVWAQSPGMAESERDAFLAR
FDAGGRGVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQINDVNEQMRRAMDARFGNGY
DYIYLYPGLQKVVQAAGRVIRTERDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcatcgccggccacggcgccgtc
acgtcggcgcgcggcgcacgctacgaaaccgaaatcgcgctcgccggcacgtggggcacg
ctgaccgtgcgcgggcgtgcggacggctacgacccgctcgcgaaccgcctcgaggagatc
aagacctaccgcggcagcctcgacgcgatgccggccaaccatcgcgcgctgcactgggcg
caggcgaaggtctatgcgcatctgatgtgcgcgacgcgcggcctcgccgaaatcaacgtc
gcgctcgtctatttcgacatcgtgtccgagcgcgaaacggtgctgacggaaacgctgagc
gccgaggcgctcgccgcgttcttcgccgaacagtgcgcgtgcttcgtcggctgggccgag
cgcgaggccgcgcatcgtgcggcccgcgatgaggcgctgcgcgcgctgaccttcccgcac
gggcagttccgcagcgggcagcgcgagctggccgtgtccgtctatcgcgcggcgcgcgac
gaaggctgcctgatcgcccaggcgccgaccgggatcggcaagacgctcggcaccgtgttt
ccgatgctgaaggcgtgcggcgaaggcaagctcgatcacgtgttcttcctgaccgccaag
acgcccggccgcgcgctcgcgctcgacgcggccaggacgctcggtgccggcacgccggcg
ctgccgctgcgcgtgctcgaactcgtcgcgcgcgacaaggcatgcgagcatcccgatcgc
gcgtgtcacggcgagtcgtgcccgctggcgcagggcttctacgaccggctgccggccgcg
cgcgacgccgcgatcggcgcggggctgctcgatcgcgagaccgtgcgcgccgccgcgctc
gcgcacgacgtgtgtccgtattacctcgcgcaggagctggcgcgctggtccgacatggcg
atcggcgactacaactactactacgacggcagcgcgatgctgcatgcgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgcccgg
cggatgtacagcgcgtcgctcgacccgttcgcgtttgccgccgcgcgcgaagcggcgccg
ccgacgctgcgcaaggcgttcgaccggctcgcgcgcgcgtggggcgcgctcaatcgtgcg
caggccgagcgctatgcggcgtacccggcgattccggcagggctcgtgtccgcggtgcag
aacctcgtggcgacgatcggcgagcacctgaccgatgcgccgcgcgcgaacgacgacgcg
ctgttgcgcttccatttcgacgcgatccagttcggcgtgctcgccgatgcattcgacagc
gcgtcgatcttcgacgcgaccttgcacggcgagccgctgccgcgtcaggcggcactcgaa
acggtcgatgcggttgatacgctcgtgccggctgcgcgccgccgtcgcatccagtcgacg
ctgtgcgtgcgcaacgtgataccggccggttttctcgcgccgcgctacgaggccgcccgc
gccaccgtgctgttttccggcacgttgagcccgttccggttctatcgcgacacgctcggc
ttgccggccgacacgggctggctcgacgtcgaagggccgtttcgcgccgagcagttgacg
gtgcgcgtggcgagccacgtgtcgacgcgctggcgcgatcgtgaccgctcgctcgagccg
atcgtcgatctgatcgccgcgcaatatgcgacacgtcccggcaactacctcggctttctg
agcagcttcgactatctcgcgcgcgtcgtcgcgctgatgcaggcgcgccatcccgacgtg
cctgtctgggcgcagtcgcccggcatggccgaaagcgagcgcgacgcgttcctggcgcgc
ttcgacgccggcggacgcggcgtcggcttcgcggtgctgggcggggcgttctcggaaggc
gtcgatttggtgggcgagcggctgatcggtgcgttcatcgcgacgctcggcctgccgcag
atcaacgacgtcaatgaacagatgcggcgcgcgatggacgcgcgtttcggcaacggctac
gactacatctatctgtatccgggcctgcagaaggtcgtgcaggcggccgggcgcgtgatc
cgcaccgaacgcgacgaaggcgtcgtgcatctgatcgacgatcgctaccggcgccgcgag
gtgcgcgatctgttgccgcgctggtggcgcatcggttga
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