KEGG   Burkholderia vietnamiensis G4: Bcep1808_5342
Entry
Bcep1808_5342     CDS       T00493                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
bvi  Burkholderia vietnamiensis G4
Pathway
bvi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bvi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Bcep1808_5342
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bvi02044]
    Bcep1808_5342
Secretion system [BR:bvi02044]
 Type III secretion system
  Type III secretion core apparatus
   Bcep1808_5342
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 DUF6332 type_II_gspD_N0
Other DBs
NCBI-ProteinID: ABO58290
UniProt: A4JPT7
LinkDB
Position
2:complement(2282323..2284362)
AA seq 679 aa
MRRRVAPIRIQPRRLQRAAFAMCATALLAAALCMTVAQPARAADLRWRNKPFTIVANGKK
IGDFIRELASSQGVTAVVDPKVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDP
ADQSQTQMIPIPPNAAGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAV
GSVGDPSANGAHADIRAFRLKYGWASDFTINRSGKEVTVPGVASILRRLFGRDGSTSALP
SSTPLGQAARQVKLGSGLTIAVPRLDFPDISSGPRQGGYGGADSAAGGISPFSAGGGGDA
LPQIVADPAINAVIVRDLPENMYRYQSLIDQLDERPRIVEINVTIIDINEDSLDSLGIDW
RLHTTHGDVQIGNGQNPLNGNTQYNGAGNPPLTFGIGASETGQTGTFMPTGIALTASIGG
SLRNYLLTRVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTT
GTSIKVTPMIVDEAIRHAAAVSGTPQSVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKT
MIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVT
NASMYAPDGSPVNPGADAPADPNAMSMYRPPDNDVAVPLTPRPLPGTKFGPPALPPPPDA
ASQPVAATAGAPAHVDDHH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgcgtcgacgcgtcgccccgatccggattcaaccgcgccgcctgcaacgcgccgcattc
gcgatgtgcgcgaccgcgctgctcgccgcggcgctgtgcatgacggtcgcgcaaccggcg
cgcgcggcggacctgcgctggcgcaacaagccgttcacgatcgtcgcgaacggcaagaag
atcggcgacttcatccgcgagctcgcgtcgtcgcagggcgtgacggccgtggtcgatccg
aaggtcgacggcgtgatcagcggccgcttctcgggcacgccgcagcagacgctcgacacg
atctgttcgacctacgggctcacgtggtactacgacggctcgttcctgtacgtcgatccg
gccgaccagtcgcagacgcagatgatcccgatcccgccgaacgcggccggcgagatcggc
cgcgcgctgcaggcgatgcagattccggacaagcgctacacgctcgtgatcaacgatcgc
gccaacagcgtctacgtggccggcccgcgccgctacgtcgagctggtgcggcaggcggtc
ggctcggtcggcgatccgtcggcgaacggcgcgcacgcggacatccgcgcgttccggctg
aagtacggctgggcgtcggacttcacgatcaaccgctcgggcaaggaggtgacggtgccg
ggcgtcgcgtcgatcctgcgccggctgttcggccgggacggcagcacgagcgcgctgccg
tcgagcacgccgctcgggcaggccgcgcgtcaggtgaagctcggctcggggctcacgatc
gcggtgccgcggctcgacttccccgatatttccagcggcccgcggcagggcggctacggc
ggcgcggacagcgccgcgggcggcatctcgccgttctcggccggtggcggcggcgatgcg
ctgccgcagatcgtcgccgatccggcgatcaacgcggtgatcgtgcgcgacctgccggag
aacatgtaccgctaccagtcgctgatcgaccagctcgacgagcggccgcgcatcgtcgag
atcaacgtgacgatcatcgacatcaacgaggattcgctcgacagcctcgggatcgactgg
cgcctgcacacgacgcatggcgacgtgcagatcggcaacggccagaatccgctgaacggc
aacacgcagtacaacggcgcgggcaacccgccgctcacgttcggcatcggcgcgtcggaa
accggccagaccggcaccttcatgccgaccggcatcgcgctgacggcgtcgatcggcggg
tcgctgcgcaactacctgctcacgcgcgtgaacgcgctcgcgcagaagggccaggcgcag
ctgcgctcgaagccgaaggtgctcgcgctcgacaacaccgaggcgatcctcgagaacctc
acgcagttctacgtgcaggtgcagggctatcaggattcgtcgctgtacagcgtgacgacg
gggacgagcatcaaggtcacgccgatgatcgtcgacgaggcgatccgccatgcggccgcg
gtgtcgggcacgccgcagagcgtgatgatgtcgatcgacatccaggacggcaacatcgtg
ccggggcaggcggtgtcgaacgtgccggtgatccagcagcgcaacatcgtcaccaagacg
atgatcgacgaaggcaagagcctgctgatcgccggcttcaacgacgacgaggtgcggctc
aacaagagcggcgtgccgtggctgtcggacattccgctgatcggcaacctgttcaagtac
accgacaagtcgggcaaccacatggagcgcttctacctgctgacgccgcgcgtggtgacg
aacgcgtcgatgtatgcgcccgacggctcgccggtgaatccgggcgcggacgcgccggcc
gacccgaacgcgatgtcgatgtatcggccgcccgacaacgacgtcgcggtgccgctcacg
ccgcggccgctgcccggcaccaaattcggtccgcctgcgctgccgccgccgcccgatgcg
gcgtcgcagcccgtggcggcgactgcaggagcacctgcccatgtcgacgaccatcattga

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