Burkholderia vietnamiensis G4: Bcep1808_6234
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Entry
Bcep1808_6234 CDS
T00493
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bcep1808_6234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_6234
Enzymes [BR:
bvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bcep1808_6234
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bcep1808_6234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABO59138
UniProt:
A4JS85
LinkDB
All DBs
Position
3:complement(799050..802679)
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AA seq
1209 aa
AA seq
DB search
MSNIISPALMLIHGNRSEQLRDLLVEWIKHYPLAPLESETILVQSNGIAQWLKLALAADR
DPATGEGGCGIAAALDVSLPSRFVWQAYRAVLGAESVAEVSPFDKSRLVWRLMRMLPALA
ARPAFEPLRRFISDDDDRRKRFQLAERLADLFDQYQMYRADWLARWADGDAVVLDARGGE
QPLPDEQRWQAALWHELVADVAGSDASREISSRGGRAAVHEAFMRRIAAWDDDRGPVGIP
RRIVIFGISSLPHQLLEALAALARWSQVMMCVANPCAHYWADIVPDRDLLGRRQPRQQRR
TGMPAELDLDTLHLHAHPLLASWGKQGRDFIGLLDAFDNADAREHYGPKFARIGQRIDLF
ESRGASTLLQQLQDDIRDLRPLRETQETWPDVDPATDGSIRFHVAHSAQREVEILHDQLL
AAFNADPSLRPQDVVVVVPDIEAYAPHVQAVFGLVDRSDPRYIPFSVADREQRKADPLIG
ALEMLLGLPNARLAVSDLLDLLDVPALRKRFGIDETDLPKLRAWIRGANIRWGLHAQQRA
SLGLPLDEHAAAPHTWAFGLRRMLLGYAVGSEAGAWHDIEPFDEVGGLDAALLGPLVRLI
DALDHAWRSLAEPATAPDWCERLRNLKQTFFSAHDSEDAYTLARLDNVLQAWLDACTEAR
LTDVLPLSVVSDHWLSQLDEGGLSQRFFAGAVTFATLMPMRAIPFRRVCLLGMNDGDYPR
ARVPMDFDLMRLHYRPGDRSRREDDRYLLLEALLSARDHLHVSWVGRSITDNGVRPPSVL
IGQLRDHLAAGWRLAGASGAGPDALVKALTVEHPLQPFSVAYFPPDTNDAAAVFTYAAEW
RDEPRACRDPAPPAATHVPAIVRDDPLSLRELAEFLAKPVKTFFSQRLRVALDVDETAVD
DEEPFELDSLDAWKLQDELIGVQAAHMHDDDALVAARDARMAAIRRRGDVVPGGFGDLAS
AALLEPMDELFAAYRKQLARWPVAIDGECEVAFQIAGESRVPGLSDWLGQWREDSEGRRA
RLVLETSALVEKGAYRYHKLVGHWVRHLAANLAGRHVTTVIVSKKGIVELRPLAGGDTEA
HLTALLQVWDAGMREPLPVAVESAFAWLVRRFGKDGNGAAPEDTRAAAEKAARSKYAGDA
YNKGEVAKSASLGRAFPDFDALCADGRFEALAESLLLPLLRAIVRSDTKEPKKDAKQDKA
APDAAGVDE
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatatcatttccccggcgctgatgctgatccacgggaatcgatccgagcagctt
cgcgacctgctcgtcgaatggatcaagcactatccactcgccccgctcgagagtgagacg
attctcgtccagagtaacggcatcgcgcaatggctgaagctcgcgctggccgccgaccgc
gatccagcaactggcgagggcggctgcgggatcgccgccgcgctcgacgtttcgttgccg
tcgcgcttcgtgtggcaggcgtatcgcgccgtgctcggtgcagaatcggttgcggaagtg
tcgccgttcgacaagtcgcgactcgtctggcgcctgatgcgtatgttgcccgcgctggca
gcccggccggcgttcgagccgctcaggcgcttcatcagcgacgacgacgatcggcgcaag
cggttccagctcgccgagcgccttgccgacctgttcgaccagtaccagatgtatcgcgcc
gactggctggcgcgttgggcggacggcgacgcggtcgtgctcgatgcacgcggcggcgag
cagccgttgcccgacgagcagcgctggcaggccgcgctgtggcacgaactggtggccgac
gtggcgggcagcgacgcgtcccgggagatttcgtcgagaggcgggcgggctgcggtgcac
gaagcgttcatgcgccggatcgccgcctgggacgacgaccgcgggccggtgggcattccg
cggcgcatcgtgatcttcggcatttcgagcctgccgcaccagttgctggaagcgctggcc
gcactcgcgcgctggagccaagtgatgatgtgcgtggccaatccatgcgcccactactgg
gccgacatcgtgccagaccgcgacctgctgggccggcgtcagccgcgtcagcaacggcga
accgggatgcccgccgaactcgacctcgacacgctccacttgcacgcccatccgcttctg
gcgtcgtggggcaagcaggggcgcgacttcatcggcctgctcgacgcgttcgacaacgcc
gatgcgcgcgagcattacggtccgaaattcgcgcgcatcggccagcgcatcgacctgttc
gagtcgcgcggcgcatcgacgctgctgcagcagttgcaggacgatatccgcgatctgcgt
ccgctgcgcgagacgcaggagacgtggccggacgtcgatccggcgacggacggatcgatt
cgctttcacgtcgcgcacagcgcgcagcgcgaagtcgaaatcctgcacgaccagctgctc
gcggcattcaacgcggacccgagcctgcggccgcaggacgtcgtcgtcgtggtgccagac
atcgaagcctacgcgccgcacgtgcaggccgtcttcggcctggtcgaccggagcgacccg
cgctacatcccgttcagcgtggccgaccgcgaacagcgcaaagccgatccgctcatcggt
gcactcgagatgctgctcggcttgccgaacgcgcgccttgccgtcagcgatctgctcgat
ctgctcgacgtgccggcgctgcgcaagcgcttcggtatcgacgaaaccgacctgccaaag
ctgcgtgcgtggatccgcggcgcaaacatccgatggggtttgcacgcgcagcagcgcgcg
agcctcggcttgccgctcgacgagcatgccgccgcgccccatacctgggcgttcggcctg
cggcggatgctgctcggttatgccgtcggcagcgaggcgggcgcctggcacgacatcgaa
ccgttcgacgaggtgggcggactcgacgcggcgctgctcggcccgctggtccggctgatc
gatgcgctcgaccacgcgtggcgctcgctcgccgagcctgcgacggcgccggactggtgc
gagcggctgcggaatctgaagcagacgttcttcagcgcgcacgacagtgaagacgcgtat
acgctcgcgcgcctcgacaacgtgttgcaggcctggctcgacgcatgcaccgaggctcga
ctgaccgacgtgctgccgctgtccgtcgtcagcgatcattggctgagccagctggatgag
ggcgggctctcgcagcgcttcttcgccggcgcggtgacgttcgcaaccttgatgcccatg
cgcgcgattccgttccgtcgcgtgtgcctgctcggcatgaacgacggggactatccgcgt
gcgcgcgtgccgatggatttcgacctgatgcgactgcattaccggccgggcgaccggtcg
cgccgcgaggacgaccggtatctcctgctcgaggcgctgctgtcggcgcgagaccatctt
catgtgtcgtgggtcgggcgcagcattaccgataacggcgtgcgcccgccgtcggttctg
atcggccagttgcgcgaccatctcgctgccgggtggcgcctcgcgggtgcgagcggtgcg
gggcctgacgcactcgtcaaggcgctgacggtcgagcatccgttgcaaccgttcagcgtc
gcgtatttcccgcccgacacgaatgatgcggcggcggtcttcacgtatgccgccgaatgg
cgcgacgaaccgcgcgcgtgccgcgatcccgcgccgccggccgcgacgcacgtgccggca
atcgtccgcgacgatccattgtcgcttcgcgaactcgcggagttcctggcgaaaccggtc
aagacgttttttagtcagcgactgcgcgtggcgctcgacgtcgacgagactgccgtcgac
gacgaagagccgttcgagctcgattcgctcgacgcctggaaactgcaggacgagctgatc
ggcgtgcaggccgcgcacatgcacgacgacgacgcgctcgtggccgcacgcgacgcgcgc
atggccgccatccgccggcggggcgacgtcgtgccgggcggcttcggcgatctcgcgagc
gcagcattgctcgagccgatggacgaactgttcgccgcataccgcaagcaactcgcgcga
tggcccgttgccatcgacggcgaatgcgaggtcgcatttcagatcgctggggaaagccgg
gtgcccggcctgagcgactggctcggtcaatggcgcgaggacagcgaaggccggcgtgcg
cgactggtgctcgagacgagtgcgctcgtcgagaagggcgcgtaccgatatcacaagctg
gtcggccattgggtccggcatctggcggccaacctcgcggggcggcacgtaacgaccgtg
atcgtcagcaagaagggcatcgtcgaattgcgaccgcttgccggcggcgacaccgaagcg
catctcacggcgttgctgcaggtgtgggacgcagggatgcgcgagccgctgccggtcgcg
gtggagtcggctttcgcatggctggtccggcgcttcggcaaggacggcaacggtgcggcg
ccggaggacacgcgcgcggccgccgaaaaggccgcacgttcgaaatacgcgggcgatgcg
tacaacaagggcgaagttgccaagagcgcgagcctcggccgcgcatttccggatttcgat
gcgctatgcgcggacggccggttcgaggcgcttgccgagtccttgctgttgccgctgttg
cgcgccatcgtcagaagcgacacgaaagaaccaaagaaagacgcgaagcaggacaaggcc
gcacccgacgcggcgggagtcgacgaatga
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