Burkholderia vietnamiensis G4: Bcep1808_6553
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Entry
Bcep1808_6553 CDS
T00493
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvi
Burkholderia vietnamiensis G4
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvi03032
]
Bcep1808_6553
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_6553
Enzymes [BR:
bvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcep1808_6553
DNA replication proteins [BR:
bvi03032
]
Prokaryotic type
DNA Topoisomerases
Bcep1808_6553
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcep1808_6553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABO59448
UniProt:
A4JT45
LinkDB
All DBs
Position
3:1165694..1166818
Genome browser
AA seq
374 aa
AA seq
DB search
MRAGREPKSQRAAPGRRLPRCSMTKRPSRSNGGARVDAALRHVDDRHPGYTRRRVRNGFA
YYGQDGQRIRDPDEIARINALAIPPAYTDVWICMDRRGHLQATGRDARGRKQYRYHPLWR
ETRDANKYARMAAFAAALPRIRARVARDLALPGMPRDKIVATIVRLLDTTLARIGNTEYA
RENASFGLTTLRKRHVTIRPGQVRLRFTGKSGIEHDVTVEDPRVGRIVRRCAELPGHELF
QYVDDDGARHSVGSSDVNDYLREAAGAEFTAKDYRTWAGSVQALALLRRIPHESVTQARK
QIVETVRAVAGILRNTPAVCRRCYIHPVVLDTFEAGLLDTLEVTRKPRGLRADEAAFVAL
LEQAERRSARPQKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccggacgcgaaccgaaatcgcagcgcgcggcccccggccgccgcctgccgcgc
tgcagcatgacgaagcgcccgtcccgctcgaacggcggcgcgcgggtggacgccgcgctg
cgccacgtcgacgaccggcatcccggctatacgcgccggcgcgtgcgcaacggcttcgcg
tattacggacaggacggccagcgcatccgcgaccccgacgaaatcgcgcgcatcaacgcg
ctggcgattccacccgcgtacaccgacgtgtggatctgcatggaccggcgcggccatctg
caggccacgggccgcgacgcgcgcgggcgcaagcagtaccgctatcacccgctgtggcgc
gagacgcgcgacgcgaacaagtacgcgcggatggccgccttcgcggctgcgctgccgcgg
atccgcgcgcgtgtcgcgcgcgacctcgcgctgccgggaatgccgcgcgacaagatcgtc
gcgaccatcgtccgcctgctcgacaccacgctggcgcggatcggcaacaccgaatacgca
cgcgagaacgcgtcgttcgggctgacgacgctgcgcaagcgccacgtgacgatccggccc
ggacaggtgcggctgcgcttcaccggcaagagcggcatcgagcacgacgtgacggtggag
gacccgcgcgtgggccgcatcgtgcgacgctgcgcggagctgccggggcacgagctgttc
cagtatgtggacgacgacggcgcgcgccattcggtcggctcgtccgacgtgaacgactac
ctgcgcgaagcggcgggcgcggagttcaccgcgaaggactaccggacctgggccggcagc
gtgcaggcgctggcgctgctcaggcgcatcccgcacgagagcgtcacgcaggcgcgcaag
cagatcgtcgagacggtgcgggccgtcgccggcatcctgcgcaacacgccggccgtgtgc
cggcgttgctacatccatccggtggtgctcgacacgttcgaggccggcctgctggatacg
ctcgaggtgacgcgcaagccgcgagggctgcgcgcggacgaagcggcgttcgtcgcattg
ctcgagcaggccgagcgccgctcggcccggccgcagaaaaaatga
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