Burkholderia vietnamiensis G4: Bcep1808_7349
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Entry
Bcep1808_7349 CDS
T00493
Name
(GenBank) TOPRIM domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvi
Burkholderia vietnamiensis G4
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvi03032
]
Bcep1808_7349
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_7349
Enzymes [BR:
bvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcep1808_7349
DNA replication proteins [BR:
bvi03032
]
Prokaryotic type
DNA Topoisomerases
Bcep1808_7349
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcep1808_7349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABO60226
UniProt:
A4JVC3
LinkDB
All DBs
Position
pBVIE03:complement(47449..48999)
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AA seq
516 aa
AA seq
DB search
MRNLVIVEAAGKVDTLRASLKSIGFSADVIATVGHVADNPRSLNPICLDTDLRETAYAFR
EDRLALLGKIQRAAFNADRIYIATDDDHEGDVIAQDMARYLSDYSDRLYRVRLRAITESE
LKESFGGSLSRDFDTPAWHGICRRIVDRAIGAAFTQVDGAATIPVGRVQSSLLANLQSEP
PVIGKYEVPLKLSDGGVYWTSIPIKTDADVERAMELERLAATAKVHLLDALEVDVPAARP
WGYEDVVAETSLRLRIGIDDAAAVFQEAYERGLVSYPRVRAGAFTQDAVEVAAAIAVHNG
CVFDAAQLPLRNADAEGRRAHECPRPLQDDLLLGRPMSVLDNAEALAVLVARNVIECGQL
AKRRRVRARVDGEVLGFECDLARPRRPWKLVERQAGLSLVPRPVALLRYMVKVGLGKPST
VVAHASKFLQRGLLEEKGVGFRLNERGTRWLAYASSCGFRSDTSARIEHAIEQPMSDPHA
RVREVLRQHGLLDQIKRAAAATQKSAVLDESVPEPF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaatctggtcattgtcgaggcagcagggaaagtcgataccctgcgcgcctcgctc
aagtcaatcggcttctccgccgacgtgattgcgacggtcgggcatgttgcggacaatccg
cgttcgctcaacccgatctgcctcgatacggatctacgggagaccgcatacgcgtttcgc
gaggatcgtctggcgctgctggggaagatccagcgggcagcattcaatgccgaccgaatc
tacattgccactgacgatgaccacgaaggtgacgtcatcgcgcaggacatggcgcgatat
ctctcggactacagtgacagactctacagggttcgcctgcgcgcgatcacagagtcggag
ctgaaagagtctttcggtggctcgctttcccgcgattttgacacgccggcttggcatggc
atctgccgacgaatcgtagatcgagccatcggcgccgctttcacgcaggtcgatggggcc
gcgacgatacctgtcgggcgtgtgcaaagctccttgcttgcgaacctccaatccgaacca
cccgtcatcgggaagtatgaggtcccgctcaagctaagcgacggaggcgtttattggact
tccattcccatcaaaacggacgccgatgtggagcgggcgatggagctcgagcgacttgct
gcaaccgcgaaagttcacttgttggatgcgctcgaagtggatgtcccggccgcacgcccg
tggggttacgaggacgttgtcgcggagacttccctacggctgcgcatcggcattgatgat
gcggctgccgtgtttcaggaagcatatgagcgcgggctagtgagctacccgcgcgtgcgc
gctggtgcgttcacgcaagatgcggtcgaagttgcagcggcgatcgcggtacacaacggg
tgtgtgttcgatgcggcgcagctcccactgcgcaacgcggacgctgaagggcgccgtgca
catgagtgccctcgccctctgcaggatgacctgctgctcgggcgcccaatgagcgtattg
gataacgcggaggcgctggctgtgttggtcgcacgcaatgtgattgaatgcggccagttg
gcgaagcgtcggcgagtgcgtgcacgagttgacggcgaggtcctcggcttcgagtgcgat
ctcgcccgcccgagacgcccgtggaagcttgtcgagcggcaggctggcctcagtctcgtt
ccgcgtcccgtggcactgctgcgctacatggtgaaggtagggctcggcaagcccagtacc
gtcgtcgcgcacgcttcgaaattcttgcagcgaggtttgctcgaggagaagggggttggc
tttcggctgaacgaacgcgggacgcgatggctcgcatatgcctcctcatgtggcttccga
tcggatacgtcggctcggatcgagcatgccatcgagcagccgatgtcggatccgcacgcc
cgcgtgcgagaggtgcttcgccagcacggattgttggatcaaatcaagcgagcggcggcc
gcgacccagaaaagcgctgtgctggacgaatcggttcccgagccattctga
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