Butyricimonas virosa: I6J59_12800
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Entry
I6J59_12800 CDS
T07173
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvir
Butyricimonas virosa
Pathway
bvir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6J59_12800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvir03021
]
I6J59_12800
Transcription machinery [BR:
bvir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J59_12800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
Sigma70_r2
HTH_24
HTH_10
HTH_23
HTH_40
HTH_11
HTH_5
HTH_28
CREPT
PhyR_sigma-like
HTH_AsnC-type
TEA
HTH_17
Sigma70_r3
DUF2316
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
QRO48815
UniProt:
A0A415QRN9
LinkDB
All DBs
Position
complement(3121830..3122435)
Genome browser
AA seq
201 aa
AA seq
DB search
MYMVVDYSEDRELLTLLRRGEISAFVDIYTAYYDALLNYADRLLNDMEAARDVVQQVYYK
MWENRDTLNISLSVKAYLFKSVYHGSLNTLAHQKNIQKYEREQLTDFYFSTVIQSPEAEE
ALWKSDIEQAIQEAIAILPEKCREVFVLSKIEGLKNREIAEKLNISEKTVERHMSIALSK
LREELDWLLQIILFFSFSHWG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggttgtggattattcagaagatagggaattgttaacgttattaaggcgtggt
gagatttctgcatttgtagatatatacactgcatattatgatgcgttgctgaattatgcc
gatcgtttgctgaatgatatggaggcagctcgagatgtggtgcaacaagtgtactataag
atgtgggaaaaccgggatacattgaatatctctctttctgttaaagcttatctttttaaa
tcggtttatcatggtagtctaaacacgcttgctcatcaaaagaatattcagaagtatgag
cgcgagcagttgaccgatttctatttttctaccgtgatacaatctcccgaagcggaagag
gccttgtggaagtcggatatagaacaggctatacaggaggccattgctattttacctgaa
aagtgtcgggaggttttcgtgttgagcaagattgaaggtttgaagaatcgggaaattgct
gaaaaattaaatatttcagagaaaacagttgaacgtcatatgtcaatagcgttaagcaag
ttacgagaagaattagattggctattgcaaattattttatttttttctttttctcattgg
gggtaa
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