Butyricimonas virosa: I6J59_13175
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Entry
I6J59_13175 CDS
T07173
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bvir
Butyricimonas virosa
Pathway
bvir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J59_13175 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvir03400
]
I6J59_13175 (uvrA)
DNA repair and recombination proteins [BR:
bvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J59_13175 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J59_13175 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_15
AAA_21
AAA_23
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QRO48885
LinkDB
All DBs
Position
complement(3217813..3220653)
Genome browser
AA seq
946 aa
AA seq
DB search
MEYREEEDNNIAIFGAREHNLKNIDLTIPRDKLTVITGLSGSGKSSLAFDTIYAEGQRRY
LETFSAYARRFLGGMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDFLRLLYA
RAGVAYSYATGSKMVKYTDEQILELLQRDFAGRRILLLAPVVKGRKGHYRELFENLRKNG
FISARVDGELREITIGMSVDRYKMHDIEIVVDKIVMDQVDLKRLKNSVATAMKHGKGVMT
VKDYESDEIKYYSRHLMCPDTGLSYKDPAPHTFSFNSPHGACKKCKGLGFVNEVAMEKII
PDNSLSIHAGGILPLGKYKASLIFYQIETILKKHGADIKQPIRDLPEEALTDILYGYPGQ
FRLENAEIGVSSNFLTTYEGILKYVTMQEENSTSKKANKWAEQFISVTTCDVCNGQRLNQ
EALHFYINGKNISELANMELSDLYEWVSNVEEHLEDKQKQIAGEILKEIRTRLKFMLDVG
LEYLSLNRQSMTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQKDNRKLIHSLQEL
RDNGNSVIVVEHDKEMMENADYIVDLGPKAGRKGGEIMAIGGYSDILKSDSLTAQYLKGE
KVITIPAERRAGNGKKISLKGCTGNNLKNVNVDFPLGKLICVTGVSGSGKSSLVNGTLHP
ILSAYFYNALAAPLPYKSIEGMTEIDKVVVVDQSPLGKSPRSNPATYTGLFTDIRKIFEK
LPESQIRGYTAGRFSFNVSGGRCEVCKGAGVKTIEMNFLPDVYVHCEACDGKRYNKETLE
VRYKGKSIGDVLNLTINQAVEFFENLPHLQSKLKMLQDVGLGYIKIGQPCTTLSGGESQR
IKLATELSKKDTGSTLYILDEPTTGLHFEDINILLGVLQKLVDKGNTVIVIEHNLDVIKV
ADYLIDMGPGGGKMGGTVVCTGTPEEVAQNKKSVTAPFLREELGMK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagagaagaagaagataacaatatagccatatttggtgccagagagcataat
ctaaaaaatatagatctgacgattccacgggataagttgacggtgattaccgggttaagc
gggagtggaaaatcatccttggcttttgatacgatatatgccgaagggcagcgtcggtat
ctggaaactttttccgcatacgcccgtcgttttctgggagggatggaacgtccggatgtg
gataagattaccgggttaagtcctgtgatttcaattgaacagaaaactacgaataaaaat
ccacgttctacggtcggaacgaccaccgagatttatgactttttgcgtttactttatgcc
cgtgcaggggtggcttactcgtacgctacaggtagtaagatggtaaagtacacggatgaa
cagatattggaattgttgcagcgtgattttgccgggcggcgtatcttgttgttggctccc
gtggtaaaaggacgtaagggacactaccgggagttattcgagaatttaaggaagaatggt
tttatctcggcacgggtggacggtgagttgcgggaaataacgatcgggatgagtgttgat
cgttacaagatgcacgacattgaaatcgtggtggataaaattgtcatggatcaggttgat
ctgaaacgcttgaagaattccgtggccactgccatgaaacatggtaagggcgtgatgacg
gtaaaagattacgagtctgatgagattaaatattatagccgccatttgatgtgtccggat
accgggctttcctataaagatccggccccgcatactttttctttcaattcgcctcacggg
gcttgtaagaaatgtaagggattgggatttgtcaacgaggtggcaatggaaaagattatc
ccggataattcattatccattcatgccgggggaatcctacctcttggaaaatataaggct
tcccttattttctaccagatcgaaacgattctgaaaaaacacggtgccgatattaaacaa
ccgatccgggatttgcccgaagaggccttgacggatattttgtatggttatccggggcaa
ttccgtttggagaatgcggagatcggggtatcgtccaatttcctcacgacgtacgaggga
atattgaagtatgttaccatgcaggaggaaaattcgacttccaagaaagcgaataaatgg
gcggaacagtttatttccgtgacgacctgtgacgtgtgtaacggtcaacgtttgaaccag
gaagctctacatttctatataaacgggaagaatatttccgagttggccaatatggaatta
tctgatttatacgagtgggtcagtaacgtggaggagcatctggaggataaacagaaacag
attgcgggggagattttgaaggagatccggactcgattgaagtttatgcttgatgtcggc
ttggagtatctttccttgaatcgccagtccatgacgttatcgggaggggagtctcagcgt
attcgtctggcgacacagatcggttcacagttggttaacgtcctttatatattggatgaa
ccgagtatcgggttgcatcaaaaggataaccggaagttgattcattctttacaggaattg
cgggataacggtaactcggtgatcgtggtggagcatgataaggagatgatggagaatgcc
gattacatcgtggacttgggacccaaggcgggaagaaaaggaggggagattatggctatc
ggggggtattccgatattctgaaaagtgatagtctgacggcacaatacttgaaaggggag
aaggttatcactatcccggcggaacgtcgtgcagggaatggaaagaagatttccctgaaa
ggatgtaccggaaataatcttaaaaatgtgaatgtcgattttcctctggggaaattgatt
tgcgtgaccggggtgagtggaagtggaaaatcttctttggttaatggaactttgcatccg
atattgagtgcttatttttataatgctttggctgcaccgttaccttataaatcgatagaa
gggatgactgaaatcgataaggtcgtggtggtggatcaaagcccgttaggtaaaagccct
cgttctaatccggcaacttacacgggattgtttaccgatattcggaagatatttgaaaag
ttaccggaatcacaaatccggggatacacggccggacgtttttcctttaacgtgagtgga
ggacgttgtgaggtttgtaaaggtgcgggagtgaagaccatcgagatgaatttccttccg
gatgtttacgtgcattgtgaagcttgtgatggtaaacgttacaacaaagaaactttggag
gttcgctataaaggaaaatccatcggcgatgtgttgaacctgacgattaatcaagcggta
gagttttttgaaaatctgcctcacctgcaatccaaattaaagatgttacaggatgtcggg
ttggggtatatcaagatcggacaaccttgtaccacgttaagcgggggagagtctcagcgc
attaaattggccaccgagctttcgaagaaagataccggaagtacgttatatatactggat
gagcctacaaccggacttcattttgaggatattaatatattgttgggagtgctacaaaag
ctggttgataaaggaaataccgtaatcgttatcgagcataatttggatgtgattaaagtg
gccgattatcttatcgatatgggacccggcggaggtaagatgggaggtaccgtcgtttgc
accggaacgccggaagaagttgctcagaataaaaaatccgtgacggctcctttcttgcga
gaggagttggggatgaaatga
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